RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 COL4A6Q14031 1691 aa17.76■□□□□ 0.43
SPTSSB-204ENST00000617024 COL4A4P53420 1690 aaPredicted RBP17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 TDRD15B5MCY1 1934 aaKnown RBP17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 RB1P06400 928 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 CCDC192P0DO97 292 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 EPB41P11171 864 aaKnown RBP17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 POU3F3P20264 500 aaPredicted RBP17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 CYP3A5P20815 502 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 CTNNB1P35222 781 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 OR1G1P47890 313 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 TYRO3Q06418 890 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 PSMD6Q15008 389 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 NAB2Q15742 525 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 TPD52L1Q16890 204 aaPredicted RBP17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 EPC2Q52LR7 807 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 FILIP1Q7Z7B0 1213 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 ZC3H3Q8IXZ2 948 aaKnown RBP17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 FAM186BQ8IYM0 893 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 CSGALNACT2Q8N6G5 542 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 BEST2Q8NFU1 509 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 C18orf25Q96B23 403 aaPredicted RBP17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 CCDC127Q96BQ5 260 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 EEF2KMTQ96G04 330 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 C17orf80Q9BSJ5 609 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 MKNK1Q9BUB5 465 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 COLEC11Q9BWP8 271 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 PLVAPQ9BX97 442 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 SRRTQ9BXP5 876 aaKnown RBP17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 CERS4Q9HA82 394 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 C11orf16Q9NQ32 467 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 C2CD2Q9Y426 696 aa17.75■□□□□ 0.43
SPTSSB-204ENST00000617024 SYCE3A1L190 88 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 CASTOR2A6NHX0 329 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 NT5C1B-RDH14C9J2C7 533 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 NRP1O14786 923 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 AKAP3O75969 853 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 NFICP08651 508 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 LINC00271P0C7V0 271 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 KRT13P13646 458 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 RPL9P32969 192 aaKnown RBP17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 SLC11A1P49279 550 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 WNT7BP56706 349 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 TFAMQ00059 246 aaKnown RBP17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 SKIV2LQ15477 1246 aaKnown RBP17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 ZSCAN23Q3MJ62 389 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 SPATA1Q5VX52 437 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 USP37Q86T82 979 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 TMC2Q8TDI7 906 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 PARD3BQ8TEW8 1205 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 DDX27Q96GQ7 796 aaKnown RBP17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 UROC1Q96N76 676 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 SPG21Q9NZD8 308 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 MTUS1Q9ULD2 1270 aa17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 ARIH1Q9Y4X5 557 aaPredicted RBP17.74■□□□□ 0.43
SPTSSB-204ENST00000617024 SLC16A3O15427 465 aaKnown RBP17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 B4GALT3O60512 393 aa17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 DLATP10515 647 aaKnown RBP17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 TNNI1P19237 187 aa17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 DUOXA2Q1HG44 320 aa17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 AAK1Q2M2I8 961 aa17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 DCLRE1AQ6PJP8 1040 aa17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 INTS8Q75QN2 995 aaKnown RBP17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 FBXO22Q8NEZ5 403 aa17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 ARNTL2Q8WYA1 636 aa17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 ANKRD36BP1Q96IX9 119 aa17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 POP1Q99575 1024 aaKnown RBP17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 NAT10Q9H0A0 1025 aaKnown RBP17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 DPP3Q9NY33 737 aa17.73■□□□□ 0.43
SPTSSB-204ENST00000617024 C5orf67F2Z3F1 127 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 GNA14O95837 355 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 TMEM191BP0C7N4 346 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 PPM1AP35813 382 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 PBX3P40426 434 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 VAMP7P51809 220 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 KRT17Q04695 432 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 SOX4Q06945 474 aaPredicted RBP17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 ENPEPQ07075 957 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 GSE1Q14687 1217 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 SPRED2Q7Z698 418 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 WDR49Q8IV35 697 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 EFCAB13Q8IY85 973 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 SLC39A11Q8N1S5 342 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 KLHL23Q8NBE8 558 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 MED15Q96RN5 788 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 CGRRF1Q99675 332 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 C11orf84Q9BUA3 381 aaPredicted RBP17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 DNAJC25Q9H1X3 360 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 GOLGA2P5Q9HBQ8 144 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 METTL14Q9HCE5 456 aaKnown RBP17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 INTS13Q9NVM9 706 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 TUBGCP4Q9UGJ1 667 aa17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 PRG3Q9Y2Y8 225 aaPredicted RBP17.72■□□□□ 0.43
SPTSSB-204ENST00000617024 RALGAPA2Q2PPJ7 1873 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 TADA2AO75478 443 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 FGF18O76093 207 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 TNNC2P02585 160 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 LRPAP1P30533 357 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 CLCNKBP51801 687 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 AP3M2P53677 418 aa17.71■□□□□ 0.43
SPTSSB-204ENST00000617024 GPM6BQ13491 265 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms