RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 CYFIP2Q96F07 1278 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 OSBPL8Q9BZF1 889 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 NIF3L1Q9GZT8 377 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 PCDHGC5Q9Y5F6 944 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZBED1O96006 694 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 RRM1P23921 792 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 BRD2P25440 801 aaKnown RBP14□□□□□ -0.17
PPP4R3B-206ENST00000616407 MSH2P43246 934 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 TWF2Q6IBS0 349 aaKnown RBP14□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZNF662Q6ZS27 426 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 DNERQ8NFT8 737 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 MTMR12Q9C0I1 747 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 COMMD10Q9Y6G5 202 aa14□□□□□ -0.17
PPP4R3B-206ENST00000616407 IQCA1LA6NCM1 817 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 OGTO15294 1046 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 DYNC1LI2O43237 492 aaPredicted RBP13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 SUN1O94901 812 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 GH1P01241 217 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ARL4AP40617 200 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 HSD17B4P51659 736 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 MARSP56192 900 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 CAV1Q03135 178 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 UGCGQ16739 394 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZNF677Q86XU0 584 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 MAP4K3Q8IVH8 894 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 SRRM1Q8IYB3 904 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 BEST2Q8NFU1 509 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 CCDC110Q8TBZ0 833 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ARHGEF26Q96DR7 871 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZBTB45Q96K62 511 aaPredicted RBP13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 GCOM2Q9BZD3 368 aaPredicted RBP13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 BAIAP2L1Q9UHR4 511 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 TOM1L1O75674 476 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ATP11AP98196 1134 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 TAF12Q16514 161 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 TTC13Q8NBP0 860 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 GPRC5AQ8NFJ5 357 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ARL8AQ96BM9 186 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 BCAS3Q9H6U6 928 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 CYP39A1Q9NYL5 469 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ADM5C9JUS6 153 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 MYO1CO00159 1063 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ASAP2O43150 1006 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 NOL4O94818 638 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 OR6J1Q8NGC5 347 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 RIPK3Q9Y572 518 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 GMNCA6NCL1 334 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 I3L4J1 428 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 TROVE2P10155 538 aaKnown RBP eCLIP13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 CA4P22748 312 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 HSD17B3P37058 310 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 TFDP2Q14188 446 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 CFAP157Q5JU67 520 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ANKRD20A3Q5VUR7 823 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 NUGGCQ68CJ6 796 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 CCDC125Q86Z20 511 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 ELAC2Q9BQ52 826 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 TAS2R14Q9NYV8 317 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 COL20A1Q9P218 1284 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 PPP2R3BQ9Y5P8 575 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 SNX9Q9Y5X1 595 aa13.99□□□□□ -0.17
PPP4R3B-206ENST00000616407 MAGEB2O15479 319 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 CSDE1O75534 798 aaKnown RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 PPP1R37O75864 691 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 SDC4P31431 198 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 ARSEP51690 589 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 MRPS9P82933 396 aaKnown RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 GTF2BQ00403 316 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 TMEM132BQ14DG7 1078 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 HGSNATQ68CP4 663 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 METTL7BQ6UX53 244 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 CATSPERGQ6ZRH7 1159 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 NT5DC3Q86UY8 548 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 C1orf131Q8NDD1 294 aaKnown RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 ARHGEF2Q92974 986 aaKnown RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 STK38LQ9Y2H1 464 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 A0A087WUV0 522 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 A8MXQ7 604 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 IRAK1P51617 712 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 GTF2A1P52655 376 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 MAPK7Q13164 816 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 PDZD4Q76G19 769 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 SIX6OS1Q8N1H7 587 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 PRMT7Q9NVM4 692 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 STRCP1A6NGW2 1772 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 SIPA1L3O60292 1781 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZC3H11AO75152 810 aaKnown RBP eCLIP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 RALAP11233 206 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 COILP38432 576 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 ALDH5A1P51649 535 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 NLRP11P59045 1033 aaKnown RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 NOP9Q86U38 636 aaKnown RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 EFCAB13Q8IY85 973 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 TMEM161BQ8NDZ6 487 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 FEZF2Q8TBJ5 459 aa13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 ASTN2O75129 1339 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-206ENST00000616407 CCL15-CCL14A0A0B4J2E2 113 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms