RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 PCDHA2Q9Y5H9 948 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 ASTN1O14525 1302 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 SMAPO00193 183 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 T-ENOLP0DO92 83 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 SKIV2L2P42285 1042 aaKnown RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 YARSP54577 528 aaKnown RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 SLC12A3P55017 1021 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 DYNLT1P63172 113 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 DLG4P78352 724 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 IRX4P78413 519 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 GPS1Q13098 491 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 NKX1-1Q15270 411 aaPredicted RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 TBC1D25Q3MII6 688 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 PCNX4Q63HM2 1172 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 PASD1Q8IV76 773 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 CEP70Q8NHQ1 597 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 GRK7Q8WTQ7 553 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 ZNF75CPQ92670 426 aaPredicted RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 INPP5DQ92835 1189 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 ITFG2Q969R8 447 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 DDX27Q96GQ7 796 aaKnown RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 NSL1Q96IY1 281 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 ANKRD27Q96NW4 1050 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 FNBP1Q96RU3 617 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 SHCBP1LQ9BZQ2 653 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 GALNT8Q9NY28 637 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 CLIC5Q9NZA1 410 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 C1orf167Q5SNV9 1468 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 CCDC195A0A1B0GUA6 201 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 K7ENM7 598 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 ATP2A1O14983 1001 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 EDF1O60869 148 aaKnown RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 ETS1P14921 441 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 ARHGAP4P98171 946 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 BTKQ06187 659 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 PDIA2Q13087 525 aaKnown RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 MAP7Q14244 749 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 FASTKD3Q14CZ7 662 aaKnown RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 STXBP4Q6ZWJ1 553 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 CLNKQ7Z7G1 428 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 TTC7BQ86TV6 843 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 RASSF3Q86WH2 238 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 CCDC89Q8N998 374 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 WDR66Q8TBY9 1149 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 ACSF2Q96CM8 615 aaPredicted RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 FAM84AQ96KN4 292 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 PCDHB18PQ96TA0 734 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 ZNF184Q99676 751 aaPredicted RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 CENPKQ9BS16 269 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 BTBD10Q9BSF8 475 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 TMEM117Q9H0C3 514 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 OCEL1Q9H607 264 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 PARVGQ9HBI0 331 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 PREBQ9HCU5 417 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 LRRC4BQ9NT99 713 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 NDE1Q9NXR1 346 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 LMCD1Q9NZU5 365 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 WHRNQ9P202 907 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 LARSQ9P2J5 1176 aaKnown RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 ANKFY1Q9P2R3 1169 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 STARD13Q9Y3M8 1113 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 NEU2Q9Y3R4 380 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 NCANO14594 1321 aa7.07□□□□□ -1.28
LMO3-235ENST00000616247 XIRP1Q702N8 1843 aaKnown RBP7.07□□□□□ -1.28
LMO3-235ENST00000616247 A6NJR5 290 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 E7ENQ6 273 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 TGFB1I1O43294 461 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 HNRNPRO43390 633 aaKnown RBP7.06□□□□□ -1.28
LMO3-235ENST00000616247 GGPS1O95749 300 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 GSTA2P09210 222 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 KRT10P13645 584 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 AMPD1P23109 780 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 ANXA13P27216 316 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 POLD1P28340 1107 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 SERPINB6P35237 376 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 COG7P83436 770 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 DBN1Q16643 649 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 BBS9Q3SYG4 887 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 TBC1D9BQ66K14 1250 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 RGS9BPQ6ZS82 235 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 CTAGE3PQ8IX95 158 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 ST13P4Q8IZP2 240 aaPredicted RBP7.06□□□□□ -1.28
LMO3-235ENST00000616247 ARHGAP24Q8N264 748 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 ATL2Q8NHH9 583 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 NRG4Q8WWG1 115 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 CPA5Q8WXQ8 436 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 DHX38Q92620 1227 aaKnown RBP7.06□□□□□ -1.28
LMO3-235ENST00000616247 PRR11Q96HE9 360 aaPredicted RBP7.06□□□□□ -1.28
LMO3-235ENST00000616247 DNAJC1Q96KC8 554 aaKnown RBP7.06□□□□□ -1.28
LMO3-235ENST00000616247 MIPEPQ99797 713 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 SYNCQ9H7C4 482 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 KIAA1586Q9HCI6 787 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 DDX18Q9NVP1 670 aaKnown RBP7.06□□□□□ -1.28
LMO3-235ENST00000616247 USP20Q9Y2K6 914 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 COL1A1P02452 1464 aaPredicted RBP7.06□□□□□ -1.28
LMO3-235ENST00000616247 SGK1O00141 431 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 GSC2O15499 205 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 EDIL3O43854 480 aa7.06□□□□□ -1.28
LMO3-235ENST00000616247 ZWINTO95229 277 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms