RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SDCCAG8Q86SQ7 713 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 MAGEB5Q9BZ81 275 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 ANGPTL3Q9Y5C1 460 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 ZC3H11AO75152 810 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 FGRP09769 529 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 WEE2P0C1S8 567 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 AXLP30530 894 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 SSTR3P32745 418 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 CAV1Q03135 178 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 KLHDC7AQ5VTJ3 777 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 TRIM42Q8IWZ5 723 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 ARHGAP18Q8N392 663 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 DPF3Q92784 378 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 SLITRK1Q96PX8 696 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 FAM49BQ9NUQ9 324 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 GRID2IPA4D2P6 1211 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 PPP1R12AO14974 1030 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 SLITRK3O94933 977 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 THP07101 528 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 MCF2P10911 925 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 RAG1P15918 1043 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 TSTA3Q13630 321 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 CLMNQ96JQ2 1002 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 ERGIC2Q96RQ1 377 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 HINFPQ9BQA5 517 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 CACYBPQ9HB71 228 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 KANSL3Q9P2N6 904 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 DSEQ9UL01 958 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 KIAA1257Q9ULG3 409 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 ZBTB48P10074 688 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 UBA1P22314 1058 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 TPI1P60174 286 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 CACNB2Q08289 660 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 ELAVL2Q12926 359 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 CUL2Q13617 745 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 TMEM132BQ14DG7 1078 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 CCDC144BQ3MJ40 725 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 EFHC1Q5JVL4 640 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 MMS22LQ6ZRQ5 1243 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 DNAJB3Q8WWF6 145 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 DDX27Q96GQ7 796 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 VPS39Q96JC1 886 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 TTC25Q96NG3 672 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 YME1L1Q96TA2 773 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 MID2Q9UJV3 735 aa9.99□□□□□ -0.81
CLTCL1-208ENST00000615606 APOL1O14791 398 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 LGALS2P05162 132 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 ROR1Q01973 937 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 PIGHQ14442 188 aaPredicted RBP9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 GOLGA7BQ2TAP0 167 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 GLRA4Q5JXX5 417 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 CELF3Q5SZQ8 465 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 CBWD2Q8IUF1 395 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 ARHGAP24Q8N264 748 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 CPA5Q8WXQ8 436 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 CFAP36Q96G28 342 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 CABS1Q96KC9 395 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 NEMP1O14524 444 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 PQBP1O60828 265 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 CHRNA3P32297 505 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 ZNF131P52739 623 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 TMEM119Q4V9L6 283 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 WDR49Q8IV35 697 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 SYN2Q92777 582 aaPredicted RBP9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 SMYD2Q9NRG4 433 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 MT-ND3P03897 115 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 PARD3BQ8TEW8 1205 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 DEPDC1BQ8WUY9 529 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 CBWD1Q9BRT8 395 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 PI4K2AQ9BTU6 479 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 TMEM39AQ9NV64 488 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 TRPV2Q9Y5S1 764 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 TOPAZ1Q8N9V7 1692 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 LRG1P02750 347 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 GALCP54803 685 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 ZNF235Q14590 738 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 ARHGAP15Q53QZ3 475 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 GKAP1Q5VSY0 366 aaPredicted RBP9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 GPAT2Q6NUI2 795 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 ILDR1Q86SU0 546 aaPredicted RBP9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 SPATA24Q86W54 205 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 CPB2Q96IY4 423 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 UBIAD1Q9Y5Z9 338 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 NFASCO94856 1347 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 FRMPD4Q14CM0 1322 aa9.98□□□□□ -0.81
CLTCL1-208ENST00000615606 EXOC1LA0A1B0GW35 172 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 ATICP31939 592 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 PAPOLAP51003 745 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 IL9RQ01113 521 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 FAM110CQ1W6H9 321 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 ACCSLQ4AC99 568 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 SLC30A5Q8TAD4 765 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 LRRC8CQ8TDW0 803 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 PDCD6IPQ8WUM4 868 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 MTMR12Q9C0I1 747 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 ROBO3Q96MS0 1386 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 ZC3H4Q9UPT8 1303 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 ZMYND10O75800 440 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 URODP06132 367 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms