RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 PPM1LQ5SGD2 360 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 FAM117BQ6P1L5 589 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 WDR49Q8IV35 697 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 UNC45BQ8IWX7 931 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 NUP85Q9BW27 656 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 FBXO2Q9UK22 296 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 TRIM66O15016 1216 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 SLC4A1P02730 911 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 PGK2P07205 417 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 EIF3BP55884 814 aaKnown RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 PRKCQQ04759 706 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 DRAP1Q14919 205 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 PPP6R3Q5H9R7 873 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 APOBEC3HQ6NTF7 200 aaKnown RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 GPR142Q7Z601 462 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 SPATS2Q86XZ4 545 aaKnown RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 CACNA2D3Q8IZS8 1091 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 AGPAT1Q99943 283 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 VPS18Q9P253 973 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 APEX2Q9UBZ4 518 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 CKBP12277 381 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 WASHC5Q12768 1159 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 STARD3Q14849 445 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 OOSP2Q86WS3 158 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 GRAMD1CQ8IYS0 662 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 SPON2Q9BUD6 331 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 KIFC3Q9BVG8 833 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 FBXO44Q9H4M3 255 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 FBXL21Q9UKT6 434 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 COL1A1P02452 1464 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 KPNA7A9QM74 516 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 KIF3CO14782 793 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 CDC25AP30304 524 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 SATB1Q01826 763 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 REPS2Q8NFH8 660 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 SH3KBP1Q96B97 665 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 CAPNS2Q96L46 248 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 RGL1Q9NZL6 768 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 LARGE1O95461 756 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 MOCS2O96007 188 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 MBL2P11226 248 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 ACADMP11310 421 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 PRCPP42785 496 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 ATN1P54259 1190 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 NFIAQ12857 509 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 SMYD4Q8IYR2 804 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 SDCCAG3Q96C92 435 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZNF558Q96NG5 402 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 CGRRF1Q99675 332 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 PCDHB5Q9Y5E4 795 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 KLRC2P26717 231 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 TBCCQ15814 346 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 GOLGA7BQ2TAP0 167 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 DPCR1Q3MIW9 517 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 DCAF6Q58WW2 860 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 C10orf120Q5SQS8 335 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 ATG16L1Q676U5 607 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 JADE1Q6IE81 842 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZFP91Q96JP5 570 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 TLR8Q9NR97 1041 aaKnown RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 F5H5T6 163 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 EEF2KO00418 725 aaKnown RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 CLGNO14967 610 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 SYNCRIPO60506 623 aaKnown RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 MFAP3LO75121 409 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 KLRC1P26715 233 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 TUFMP49411 452 aaKnown RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZNF177Q13360 481 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 DGKZQ13574 1117 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 POLD3Q15054 466 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 RBBP5Q15291 538 aaKnown RBP10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 SLC27A1Q6PCB7 646 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 TMEM86AQ8N2M4 240 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 LRRC8CQ8TDW0 803 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 CHMP6Q96FZ7 201 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 SENP7Q9BQF6 1050 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 MFSD1Q9H3U5 465 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 RAB23Q9ULC3 237 aa10.29□□□□□ -0.76
TNFRSF9-204ENST00000615230 DFFAO00273 331 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 TTC4O95801 387 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 SAT1P21673 171 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 BCAR1P56945 870 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 CBX1P83916 185 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 DR1Q01658 176 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 TIGD7Q6NT04 549 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 TMC7Q7Z402 723 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 LRRC71Q8N4P6 559 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 FIBCD1Q8N539 461 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 TMC2Q8TDI7 906 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 TSPAN17Q96FV3 270 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 SRPK1Q96SB4 655 aaKnown RBP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 SENP6Q9GZR1 1112 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZCCHC17Q9NP64 241 aaKnown RBP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 CHST12Q9NRB3 414 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 TMEM63CQ9P1W3 806 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 SPDYE5A6NIY4 337 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 KRT37O76014 449 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 NDUFA10O95299 355 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms