RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TEX101Q9BY14 249 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 RNPEPQ9H4A4 650 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 PCDHB1Q9Y5F3 818 aa6.61□□□□□ -1.35
SCAMP1-205ENST00000614488 E2F8A0AVK6 867 aa6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 HAUS5O94927 633 aa6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 CFIP05156 583 aa6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 MTHFD1P11586 935 aaKnown RBP6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 SLC6A2P23975 617 aa6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 TTF1Q15361 905 aaPredicted RBP6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 GADL1Q6ZQY3 521 aa6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 FITM2Q8N6M3 262 aa6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 HOOK2Q96ED9 719 aa6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 DMRTA2Q96SC8 542 aa6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 MAN1C1Q9NR34 630 aa6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 AASDHPPTQ9NRN7 309 aa6.6□□□□□ -1.35
SCAMP1-205ENST00000614488 CENPVL1A0A0U1RR11 272 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 A0A1B0GTW7 788 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 TCRBV7S2A1N4TA0A589 114 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 KIAA0391O15091 583 aaKnown RBP6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 GRM6O15303 877 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 ABLIM3O94929 683 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 NDUFA10O95299 355 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 IL33O95760 270 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 CKBP12277 381 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 AKAP5P24588 427 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 FXR1P51114 621 aaKnown RBP eCLIP6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 DSC2Q02487 901 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 PTPAQ15257 358 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 TSHZ3Q63HK5 1081 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 MAPKAPK5Q8IW41 473 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 ARHGEF19Q8IW93 802 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 CPEB3Q8NE35 698 aaKnown RBP6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 IL17RDQ8NFM7 739 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 NUP133Q8WUM0 1156 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 MLST8Q9BVC4 326 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 GSTO2Q9H4Y5 243 aa6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 ING1Q9UK53 422 aaPredicted RBP6.59□□□□□ -1.35
SCAMP1-205ENST00000614488 SLC16A6O15403 523 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 CD1AP06126 327 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 PDCP20941 246 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 DDX6P26196 483 aaKnown RBP eCLIP6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 OCA2Q04671 838 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 DPTQ07507 201 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 MCL1Q07820 350 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 THEMIS2Q5TEJ8 643 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 USP45Q70EL2 814 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 ZNF627Q7L945 461 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 PRR18Q8N4B5 295 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 PACSIN1Q9BY11 444 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 POLHQ9Y253 713 aa6.58□□□□□ -1.36
SCAMP1-205ENST00000614488 CDHR4A6H8M9 788 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 TMEM191CA6NGB0 347 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 PRSS23O95084 383 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 ARIH2O95376 493 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 ELANEP08246 267 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 POU2F2P09086 479 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 FGFR4P22455 802 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 SLC6A4P31645 630 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 EPHB1P54762 984 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 ZNF280AP59817 542 aaPredicted RBP6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 GUCY1B3Q02153 619 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 PIN1Q13526 163 aaPredicted RBP6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 Q6ZPA2 131 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 LDLRAD3Q86YD5 345 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 TMEM132CQ8N3T6 1108 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 CAMKK2Q96RR4 588 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 ADAM2Q99965 735 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 JKAMPQ9P055 326 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 KCNE5Q9UJ90 142 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 ANKRD6Q9Y2G4 727 aa6.57□□□□□ -1.36
SCAMP1-205ENST00000614488 LPXNO60711 386 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 SLC43A1O75387 559 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 MALP21145 153 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 INHBCP55103 352 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 TGFB2P61812 414 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 SLFN5Q08AF3 891 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 RESTQ13127 1097 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 SPDYE7PQ495Y7 208 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 B3GNTL1Q67FW5 361 aaPredicted RBP6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 ZNF365Q70YC5 407 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 FAM43AQ8N2R8 423 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 C3orf20Q8ND61 904 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 TBC1D15Q8TC07 691 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 FUBP1Q96AE4 644 aaKnown RBP6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 MED15Q96RN5 788 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 PNKPQ96T60 521 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 ZSWIM1Q9BR11 485 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 MRIQ9BWK5 157 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 SIDT1Q9NXL6 827 aaKnown RBP6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 RNF181Q9P0P0 153 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 IP6K2Q9UHH9 426 aa6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 PNMA8BQ9ULN7 279 aaPredicted RBP6.56□□□□□ -1.36
SCAMP1-205ENST00000614488 CDKL5O76039 1030 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 GPANK1O95872 356 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 SBK3P0C264 359 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 FTH1P19P0C7X4 201 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 PF4V1P10720 104 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 NOMO3P69849 1222 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 BLOC1S1P78537 153 aa6.55□□□□□ -1.36
SCAMP1-205ENST00000614488 PURAQ00577 322 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms