RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 FBXL21Q9UKT6 434 aa19.28■□□□□ 0.68
TNFAIP3-207ENST00000614035 CCL16O15467 120 aa19.27■□□□□ 0.68
TNFAIP3-207ENST00000614035 GRIN1Q05586 938 aa19.27■□□□□ 0.68
TNFAIP3-207ENST00000614035 SF3A1Q15459 793 aaKnown RBP19.27■□□□□ 0.68
TNFAIP3-207ENST00000614035 VARS2Q5ST30 1063 aaKnown RBP19.27■□□□□ 0.68
TNFAIP3-207ENST00000614035 GPBP1Q86WP2 473 aa19.27■□□□□ 0.68
TNFAIP3-207ENST00000614035 SIX5Q8N196 739 aa19.27■□□□□ 0.68
TNFAIP3-207ENST00000614035 HAPLN2Q9GZV7 340 aa19.27■□□□□ 0.68
TNFAIP3-207ENST00000614035 PLEKHA5Q9HAU0 1116 aa19.27■□□□□ 0.68
TNFAIP3-207ENST00000614035 CDH7Q9ULB5 785 aa19.27■□□□□ 0.68
TNFAIP3-207ENST00000614035 H0Y858 1186 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 TBC1D4O60343 1298 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 CLTAP09496 248 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 PLCG1P19174 1290 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 AOC1P19801 751 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 PDCP20941 246 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 NTHL1P78549 312 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 SEZ6Q53EL9 994 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 FLCNQ8NFG4 579 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 ZNF461Q8TAF7 563 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 POLIQ9UNA4 740 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 NUB1Q9Y5A7 615 aa19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.26■□□□□ 0.67
TNFAIP3-207ENST00000614035 TTC26A0AVF1 554 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 ABLIM3O94929 683 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 PIGRP01833 764 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 CFHP08603 1231 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 CXCL8P10145 99 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 ROR1Q01973 937 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 MRPL58Q14197 206 aaKnown RBP19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 KARSQ15046 597 aaKnown RBP19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 RAD54LQ92698 747 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 FGF13Q92913 245 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 BICD1Q96G01 975 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 SUSD3Q96L08 255 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 CCSER1Q9C0I3 900 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 PARVGQ9HBI0 331 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 KCNH3Q9ULD8 1083 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 TBX20Q9UMR3 447 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 NUMBLQ9Y6R0 609 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 NOTCH4Q99466 2003 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 ARHGEF37A1IGU5 675 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 VPS37CA5D8V6 355 aaPredicted RBP19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 KRBA1A5PL33 1030 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 H7C4K7 107 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 FAM189A1O60320 539 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 FAM13AO94988 1023 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 DHX8Q14562 1220 aaKnown RBP19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 MCM6Q14566 821 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 ZBTB6Q15916 424 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 KYAT1Q16773 422 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 MYCT1Q8N699 235 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 ATOH1Q92858 354 aaPredicted RBP19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 RTP3Q9BQQ7 232 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 SLC2A4RGQ9NR83 387 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 FAM86C1Q9NVL1 165 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 DNMT3BQ9UBC3 853 aaKnown RBP19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 TUBGCP4Q9UGJ1 667 aa19.25■□□□□ 0.67
TNFAIP3-207ENST00000614035 USP34Q70CQ2 3546 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 WDR27A2RRH5 827 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 HNRNPDLO14979 420 aaKnown RBP19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 PI15O43692 258 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 TRAK2O60296 914 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 ATF2P15336 505 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 ABCD1P33897 745 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 MATR3P43243 847 aaKnown RBP eCLIP19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 LIG4P49917 911 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 PABPC1LQ4VXU2 614 aaKnown RBP19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 RASSF8Q8NHQ8 419 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 ITFG1Q8TB96 612 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 LARP4BQ92615 738 aaKnown RBP19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 FGF14Q92915 247 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 FIZ1Q96SL8 496 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 HCFC1R1Q9NWW0 138 aa19.24■□□□□ 0.67
TNFAIP3-207ENST00000614035 K7ENM7 598 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 CYP3A5P20815 502 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 LRPAP1P30533 357 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 MCM4P33991 863 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 PPP2R3AQ06190 1150 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 PTPAQ15257 358 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 PARM1Q6UWI2 310 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 MTSS1LQ765P7 747 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 APPL2Q8NEU8 664 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 GPR152Q8TDT2 470 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 TSPAN18Q96SJ8 248 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 AVENQ9NQS1 362 aaPredicted RBP19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 FBXL5Q9UKA1 691 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 CLIC4Q9Y696 253 aa19.23■□□□□ 0.67
TNFAIP3-207ENST00000614035 A0A0B4J269 797 aa19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 OGTO15294 1046 aa19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 TBCAO75347 108 aaKnown RBP19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 KRT18P05783 430 aaKnown RBP19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 ADRB2P07550 413 aa19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 ELF1P32519 619 aa19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 DDIT3P35638 169 aa19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 TNFSF9P41273 254 aa19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 AARSP49588 968 aaKnown RBP eCLIP19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 GTF2BQ00403 316 aa19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 CTXN3Q4LDR2 81 aa19.22■□□□□ 0.67
TNFAIP3-207ENST00000614035 TPGS2Q68CL5 300 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms