RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ST3GAL1Q11201 340 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 FAM78AQ5JUQ0 283 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 SLC8B1Q6J4K2 584 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 ZNF852Q6ZMS4 543 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 TMEM130Q8N3G9 435 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 DEPTORQ8TB45 409 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 GTF3C6Q969F1 213 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 ZSWIM3Q96MP5 696 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 ZMAT2Q96NC0 199 aaKnown RBP25.78■■□□□ 1.72
MMP28-203ENST00000612672 CORO1BQ9BR76 489 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 POLR3CQ9BUI4 534 aaPredicted RBP25.78■■□□□ 1.72
MMP28-203ENST00000612672 SMIM28A0A1B0GU29 152 aa25.77■■□□□ 1.72
MMP28-203ENST00000612672 DCDC2BA2VCK2 349 aa25.77■■□□□ 1.72
MMP28-203ENST00000612672 MOSPD3O75425 235 aa25.77■■□□□ 1.72
MMP28-203ENST00000612672 MCM7P33993 719 aa25.77■■□□□ 1.72
MMP28-203ENST00000612672 LPAL2Q16609 132 aa25.77■■□□□ 1.72
MMP28-203ENST00000612672 ATF7IP2Q5U623 682 aa25.77■■□□□ 1.72
MMP28-203ENST00000612672 ANKS3Q6ZW76 656 aa25.77■■□□□ 1.72
MMP28-203ENST00000612672 DNASE1L2Q92874 299 aa25.77■■□□□ 1.72
MMP28-203ENST00000612672 NACC1Q96RE7 527 aa25.77■■□□□ 1.72
MMP28-203ENST00000612672 PTPN2P17706 415 aa25.76■■□□□ 1.71
MMP28-203ENST00000612672 RTL10Q7L3V2 364 aa25.76■■□□□ 1.71
MMP28-203ENST00000612672 HS6ST3Q8IZP7 471 aa25.76■■□□□ 1.71
MMP28-203ENST00000612672 ZNF461Q8TAF7 563 aa25.76■■□□□ 1.71
MMP28-203ENST00000612672 BORCS6Q96GS4 357 aa25.76■■□□□ 1.71
MMP28-203ENST00000612672 NELL2Q99435 816 aa25.76■■□□□ 1.71
MMP28-203ENST00000612672 CDT1Q9H211 546 aa25.76■■□□□ 1.71
MMP28-203ENST00000612672 CHRDQ9H2X0 955 aa25.76■■□□□ 1.71
MMP28-203ENST00000612672 USP18Q9UMW8 372 aa25.76■■□□□ 1.71
MMP28-203ENST00000612672 ARHGEF35A5YM69 484 aa25.75■■□□□ 1.71
MMP28-203ENST00000612672 LRG1P02750 347 aa25.75■■□□□ 1.71
MMP28-203ENST00000612672 XKR4Q5GH76 650 aa25.75■■□□□ 1.71
MMP28-203ENST00000612672 VITQ6UXI7 678 aa25.75■■□□□ 1.71
MMP28-203ENST00000612672 ALKAL1Q6UXT8 129 aa25.75■■□□□ 1.71
MMP28-203ENST00000612672 UROC1Q96N76 676 aa25.75■■□□□ 1.71
MMP28-203ENST00000612672 ASB16Q96NS5 453 aa25.75■■□□□ 1.71
MMP28-203ENST00000612672 INSL5Q9Y5Q6 135 aa25.75■■□□□ 1.71
MMP28-203ENST00000612672 RPA1P27694 616 aa25.74■■□□□ 1.71
MMP28-203ENST00000612672 ARPP19P56211 112 aa25.74■■□□□ 1.71
MMP28-203ENST00000612672 OSTNP61366 133 aa25.74■■□□□ 1.71
MMP28-203ENST00000612672 GAS6Q14393 721 aa25.74■■□□□ 1.71
MMP28-203ENST00000612672 TAS1R3Q7RTX0 852 aa25.74■■□□□ 1.71
MMP28-203ENST00000612672 MAP4K3Q8IVH8 894 aa25.74■■□□□ 1.71
MMP28-203ENST00000612672 BRD9Q9H8M2 597 aa25.74■■□□□ 1.71
MMP28-203ENST00000612672 RALGAPA1Q6GYQ0 2036 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 PODXLO00592 558 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 PRRG1O14668 218 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 NCAM2O15394 837 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 ATF2P15336 505 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 GJA1P17302 382 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 GUCY1B3Q02153 619 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 LMNB2Q03252 620 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 MRPL58Q14197 206 aaKnown RBP25.73■■□□□ 1.71
MMP28-203ENST00000612672 WDR44Q5JSH3 913 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 TCEAL8Q8IYN2 117 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 GPR161Q8N6U8 529 aaKnown RBP25.73■■□□□ 1.71
MMP28-203ENST00000612672 C18orf25Q96B23 403 aaPredicted RBP25.73■■□□□ 1.71
MMP28-203ENST00000612672 CYP4F11Q9HBI6 524 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 ZNF334Q9HCZ1 680 aaPredicted RBP25.73■■□□□ 1.71
MMP28-203ENST00000612672 PTPRHQ9HD43 1115 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 CEP72Q9P209 647 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 FBXL5Q9UKA1 691 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 CDV3Q9UKY7 258 aaKnown RBP25.73■■□□□ 1.71
MMP28-203ENST00000612672 TNFSF13BQ9Y275 285 aa25.73■■□□□ 1.71
MMP28-203ENST00000612672 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.73■■□□□ 1.71
MMP28-203ENST00000612672 ABLIM1O14639 778 aa25.72■■□□□ 1.71
MMP28-203ENST00000612672 HOXC13P31276 330 aa25.72■■□□□ 1.71
MMP28-203ENST00000612672 VIPR2P41587 438 aa25.72■■□□□ 1.71
MMP28-203ENST00000612672 GRM5P41594 1212 aa25.72■■□□□ 1.71
MMP28-203ENST00000612672 DMWDQ09019 674 aa25.72■■□□□ 1.71
MMP28-203ENST00000612672 SPEM2Q0P670 501 aa25.72■■□□□ 1.71
MMP28-203ENST00000612672 RSPRY1Q96DX4 576 aa25.72■■□□□ 1.71
MMP28-203ENST00000612672 ZFP14Q9HCL3 533 aa25.72■■□□□ 1.71
MMP28-203ENST00000612672 MRPS17Q9Y2R5 130 aaKnown RBP25.72■■□□□ 1.71
MMP28-203ENST00000612672 CHD6Q8TD26 2715 aa25.72■■□□□ 1.71
MMP28-203ENST00000612672 LAMA1P25391 3075 aa25.71■■□□□ 1.71
MMP28-203ENST00000612672 KIF26AQ9ULI4 1882 aaPredicted RBP25.71■■□□□ 1.71
MMP28-203ENST00000612672 PRR5-ARHGAP8B1AHC4 643 aa25.71■■□□□ 1.71
MMP28-203ENST00000612672 TRAPPC3O43617 180 aa25.71■■□□□ 1.71
MMP28-203ENST00000612672 GDI1P31150 447 aa25.71■■□□□ 1.71
MMP28-203ENST00000612672 ARHGAP8P85298 464 aa25.71■■□□□ 1.71
MMP28-203ENST00000612672 SATB1Q01826 763 aa25.71■■□□□ 1.71
MMP28-203ENST00000612672 PPP2R5AQ15172 486 aa25.71■■□□□ 1.71
MMP28-203ENST00000612672 ZNF174Q15697 407 aa25.71■■□□□ 1.71
MMP28-203ENST00000612672 DAW1Q8N136 415 aa25.71■■□□□ 1.71
MMP28-203ENST00000612672 ACO2Q99798 780 aaKnown RBP25.71■■□□□ 1.71
MMP28-203ENST00000612672 TRMT61BQ9BVS5 477 aaKnown RBP25.71■■□□□ 1.71
MMP28-203ENST00000612672 BHMT2Q9H2M3 363 aa25.71■■□□□ 1.71
MMP28-203ENST00000612672 ARNTLO00327 626 aa25.7■■□□□ 1.7
MMP28-203ENST00000612672 VNN2O95498 520 aa25.7■■□□□ 1.7
MMP28-203ENST00000612672 OR52Z1P0C646 297 aa25.7■■□□□ 1.7
MMP28-203ENST00000612672 EFNA5P52803 228 aa25.7■■□□□ 1.7
MMP28-203ENST00000612672 FAM126AQ9BYI3 521 aaPredicted RBP25.7■■□□□ 1.7
MMP28-203ENST00000612672 LMAN1LQ9HAT1 526 aa25.7■■□□□ 1.7
MMP28-203ENST00000612672 PIAS3Q9Y6X2 628 aa25.7■■□□□ 1.7
MMP28-203ENST00000612672 FRYQ5TBA9 3013 aa25.69■■□□□ 1.7
MMP28-203ENST00000612672 ELF1P32519 619 aa25.69■■□□□ 1.7
MMP28-203ENST00000612672 SRSF5Q13243 272 aaKnown RBP25.69■■□□□ 1.7
MMP28-203ENST00000612672 ZNF568Q3ZCX4 644 aa25.69■■□□□ 1.7
MMP28-203ENST00000612672 PDZD4Q76G19 769 aaPredicted RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms