RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CYP26A1O43174 497 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 ARIH2O95376 493 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 USP8P40818 1118 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 NPTX2P47972 431 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 SOX10P56693 466 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 CDR2Q01850 454 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 MAP2K1Q02750 393 aaPredicted RBP15.72■□□□□ 0.11
CDH1-213ENST00000612417 MESDQ14696 234 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 FAM160B1Q5W0V3 765 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 METTL7BQ6UX53 244 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 SPIRE2Q8WWL2 714 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 MFSD14AQ96MC6 490 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 CNOT10Q9H9A5 744 aaKnown RBP15.72■□□□□ 0.11
CDH1-213ENST00000612417 NOVA2Q9UNW9 492 aaKnown RBP15.72■□□□□ 0.11
CDH1-213ENST00000612417 MAFBQ9Y5Q3 323 aaPredicted RBP15.72■□□□□ 0.11
CDH1-213ENST00000612417 GMNCA6NCL1 334 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 ANKRD63C9JTQ0 380 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 STRNO43815 780 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 DGAT1O75907 488 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 KIAA0754O94854 1291 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 MMEP08473 750 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 CYP11B1P15538 503 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 CNGA1P29973 690 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 PMS2P54278 862 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 MAGOHP61326 146 aaKnown RBP15.72■□□□□ 0.11
CDH1-213ENST00000612417 DMP1Q13316 513 aaPredicted RBP15.72■□□□□ 0.11
CDH1-213ENST00000612417 AADACL2Q6P093 401 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 ARMCX2Q7L311 632 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 DPP9Q86TI2 863 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 ZDHHC14Q8IZN3 488 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 C12orf50Q8NA57 414 aaPredicted RBP15.72■□□□□ 0.11
CDH1-213ENST00000612417 ZNF564Q8TBZ8 553 aaPredicted RBP15.72■□□□□ 0.11
CDH1-213ENST00000612417 FBXO25Q8TCJ0 367 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 SEPT1Q8WYJ6 367 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 KIFAP3Q92845 792 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 MAGOHBQ96A72 148 aaKnown RBP15.72■□□□□ 0.11
CDH1-213ENST00000612417 NUP85Q9BW27 656 aa15.72■□□□□ 0.11
CDH1-213ENST00000612417 CNOT8Q9UFF9 292 aaKnown RBP15.72■□□□□ 0.11
CDH1-213ENST00000612417 GOLGA8IPA6NC78 632 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 GOLGA8JA6NMD2 632 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 ECM2O94769 699 aaPredicted RBP15.71■□□□□ 0.11
CDH1-213ENST00000612417 OATP04181 439 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 TXNP10599 105 aaKnown RBP15.71■□□□□ 0.11
CDH1-213ENST00000612417 ATP4AP20648 1035 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 TCF7P36402 384 aaPredicted RBP15.71■□□□□ 0.11
CDH1-213ENST00000612417 PDE6CP51160 858 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 STAT5BP51692 787 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 POLGP54098 1239 aaPredicted RBP15.71■□□□□ 0.11
CDH1-213ENST00000612417 IFFO1Q0D2I5 559 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 ODF2Q5BJF6 829 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 CELF3Q5SZQ8 465 aaKnown RBP15.71■□□□□ 0.11
CDH1-213ENST00000612417 TTC27Q6P3X3 843 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 USP37Q86T82 979 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 MICALL1Q8N3F8 863 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 FBXL13Q8NEE6 735 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 MCPH1Q8NEM0 835 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 DDX1Q92499 740 aaKnown RBP15.71■□□□□ 0.11
CDH1-213ENST00000612417 CYFIP2Q96F07 1278 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 PGM2Q96G03 612 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 AZI2Q9H6S1 392 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 ATP6V0A4Q9HBG4 840 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 PDGFCQ9NRA1 345 aa15.71■□□□□ 0.11
CDH1-213ENST00000612417 LOC102724159A0A0B4J2E5 919 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 TMEM110-MUSTN1A8MSY1 372 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 PYGMP11217 842 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 FNTAP49354 379 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 LIG3P49916 1009 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 PLTPP55058 493 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 BYSLQ13895 437 aaKnown RBP15.71■□□□□ 0.1
CDH1-213ENST00000612417 TTLL4Q14679 1199 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 PWP2Q15269 919 aaKnown RBP15.71■□□□□ 0.1
CDH1-213ENST00000612417 SIX1Q15475 284 aaPredicted RBP15.71■□□□□ 0.1
CDH1-213ENST00000612417 KCTD19Q17RG1 926 aaPredicted RBP15.71■□□□□ 0.1
CDH1-213ENST00000612417 ZNF792Q3KQV3 632 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 CCDC137Q6PK04 289 aaKnown RBP15.71■□□□□ 0.1
CDH1-213ENST00000612417 C6orf89Q6UWU4 347 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 CROCCP2Q86T23 111 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 SLC13A5Q86YT5 568 aaPredicted RBP15.71■□□□□ 0.1
CDH1-213ENST00000612417 RASAL3Q86YV0 1011 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 CENPTQ96BT3 561 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 SPATA33Q96N06 139 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 NT5C1BQ96P26 610 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 KMT5AQ9NQR1 393 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 NRBP2Q9NSY0 501 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 MTUS1Q9ULD2 1270 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 SNX24Q9Y343 169 aa15.71■□□□□ 0.1
CDH1-213ENST00000612417 DENND3A2RUS2 1198 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 C5orf60A6NFR6 353 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 DCDC2CA8MYV0 355 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 ATMINO43313 823 aaPredicted RBP15.7■□□□□ 0.1
CDH1-213ENST00000612417 FSBPO95073 299 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 RPL21P46778 160 aaKnown RBP15.7■□□□□ 0.1
CDH1-213ENST00000612417 FAM110CQ1W6H9 321 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 DENND2CQ68D51 928 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 SLC39A4Q6P5W5 647 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 ENOSF1Q7L5Y1 443 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 GPR142Q7Z601 462 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 OTUD6BQ8N6M0 293 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 COPS5Q92905 334 aa15.7■□□□□ 0.1
CDH1-213ENST00000612417 SLCO2A1Q92959 643 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms