RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 TET1Q8NFU7 2136 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 SMIM28A0A1B0GU29 152 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 LRRC53A6NM62 1247 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 ZNF623O75123 536 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 GUCY2FP51841 1108 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 SLC24A5Q71RS6 500 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 ECHDC2Q86YB7 292 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 LINC01599Q8WXQ3 324 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 PGBD4Q96DM1 585 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 ZFP42Q96MM3 310 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 C1orf112Q9NSG2 853 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 DPP3Q9NY33 737 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 FBXL5Q9UKA1 691 aa18.91■□□□□ 0.62
SREK1-216ENST00000612404 AJAP1Q9UKB5 411 aaPredicted RBP18.91■□□□□ 0.62
SREK1-216ENST00000612404 R3HCC1Q9Y3T6 440 aaKnown RBP18.91■□□□□ 0.62
SREK1-216ENST00000612404 ITGB3P05106 788 aa18.9■□□□□ 0.62
SREK1-216ENST00000612404 MLH1P40692 756 aa18.9■□□□□ 0.62
SREK1-216ENST00000612404 SPOPLQ6IQ16 392 aa18.9■□□□□ 0.62
SREK1-216ENST00000612404 AGMOQ6ZNB7 445 aa18.9■□□□□ 0.62
SREK1-216ENST00000612404 UBE2Q1Q7Z7E8 422 aa18.9■□□□□ 0.62
SREK1-216ENST00000612404 GPIHBP1Q8IV16 184 aa18.9■□□□□ 0.62
SREK1-216ENST00000612404 APBB2Q92870 758 aa18.9■□□□□ 0.62
SREK1-216ENST00000612404 GAD1Q99259 594 aa18.9■□□□□ 0.62
SREK1-216ENST00000612404 DNAJC7Q99615 494 aa18.9■□□□□ 0.62
SREK1-216ENST00000612404 TSPYL2Q9H2G4 693 aaPredicted RBP18.9■□□□□ 0.62
SREK1-216ENST00000612404 NRDCO43847 1150 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 KCNE1P15382 129 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 ATF7P17544 494 aaPredicted RBP18.89■□□□□ 0.62
SREK1-216ENST00000612404 MYL6P60660 151 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 ARHGAP44Q17R89 818 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 HS1BP3Q53T59 392 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 XKR4Q5GH76 650 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 PDXDC1Q6P996 788 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 BEST2Q8NFU1 509 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 TATDN2Q93075 761 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 C18orf25Q96B23 403 aaPredicted RBP18.89■□□□□ 0.62
SREK1-216ENST00000612404 RPS6KC1Q96S38 1066 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 NAA15Q9BXJ9 866 aaKnown RBP18.89■□□□□ 0.62
SREK1-216ENST00000612404 ZNHIT6Q9NWK9 470 aaKnown RBP18.89■□□□□ 0.62
SREK1-216ENST00000612404 TUBGCP4Q9UGJ1 667 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 GIT1Q9Y2X7 761 aa18.89■□□□□ 0.62
SREK1-216ENST00000612404 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.89■□□□□ 0.62
SREK1-216ENST00000612404 TRIM43BA6NCK2 446 aa18.89■□□□□ 0.61
SREK1-216ENST00000612404 ARL5CA6NH57 179 aa18.89■□□□□ 0.61
SREK1-216ENST00000612404 C9IYK1 514 aa18.89■□□□□ 0.61
SREK1-216ENST00000612404 ZC3H11AO75152 810 aaKnown RBP eCLIP18.89■□□□□ 0.61
SREK1-216ENST00000612404 CXCL10P02778 98 aa18.89■□□□□ 0.61
SREK1-216ENST00000612404 RFX1P22670 979 aa18.89■□□□□ 0.61
SREK1-216ENST00000612404 TRIM43Q96BQ3 446 aaPredicted RBP18.89■□□□□ 0.61
SREK1-216ENST00000612404 BAG1Q99933 345 aaPredicted RBP18.89■□□□□ 0.61
SREK1-216ENST00000612404 SIX4Q9UIU6 781 aa18.89■□□□□ 0.61
SREK1-216ENST00000612404 ITGA11Q9UKX5 1188 aa18.89■□□□□ 0.61
SREK1-216ENST00000612404 RAG1P15918 1043 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 POLR2BP30876 1174 aaKnown RBP18.88■□□□□ 0.61
SREK1-216ENST00000612404 NOP14P78316 857 aaKnown RBP18.88■□□□□ 0.61
SREK1-216ENST00000612404 ZBTB6Q15916 424 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 SGSM1Q2NKQ1 1148 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 NUCKS1Q9H1E3 243 aaKnown RBP18.88■□□□□ 0.61
SREK1-216ENST00000612404 RSAD1Q9HA92 442 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 UBQLN1Q9UMX0 589 aaKnown RBP18.88■□□□□ 0.61
SREK1-216ENST00000612404 PTGESO14684 152 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 XPOTO43592 962 aaKnown RBP18.88■□□□□ 0.61
SREK1-216ENST00000612404 TIMP1P01033 207 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 SKILP12757 684 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 MFAP3P55082 362 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 ARID5AQ03989 594 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 DRAP1Q14919 205 aaPredicted RBP18.88■□□□□ 0.61
SREK1-216ENST00000612404 TCTN1Q2MV58 587 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 ZNF699Q32M78 642 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 SFMBT2Q5VUG0 894 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 HELQQ8TDG4 1101 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 KAT5Q92993 513 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 TSPAN18Q96SJ8 248 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 STK33Q9BYT3 514 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 PLAGL2Q9UPG8 496 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 AGAP1Q9UPQ3 857 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 DAAM1Q9Y4D1 1078 aa18.88■□□□□ 0.61
SREK1-216ENST00000612404 ENPP3O14638 875 aa18.87■□□□□ 0.61
SREK1-216ENST00000612404 KIAA0355O15063 1070 aa18.87■□□□□ 0.61
SREK1-216ENST00000612404 ASS1P00966 412 aaKnown RBP18.87■□□□□ 0.61
SREK1-216ENST00000612404 ITGB8P26012 769 aa18.87■□□□□ 0.61
SREK1-216ENST00000612404 AFF1P51825 1210 aaKnown RBP18.87■□□□□ 0.61
SREK1-216ENST00000612404 CCZ1BP86790 482 aa18.87■□□□□ 0.61
SREK1-216ENST00000612404 CCZ1P86791 482 aaPredicted RBP18.87■□□□□ 0.61
SREK1-216ENST00000612404 PDCD11Q14690 1871 aaKnown RBP18.87■□□□□ 0.61
SREK1-216ENST00000612404 CCDC112Q8NEF3 446 aa18.87■□□□□ 0.61
SREK1-216ENST00000612404 APOBEC3GQ9HC16 384 aaKnown RBP18.87■□□□□ 0.61
SREK1-216ENST00000612404 UBN1Q9NPG3 1134 aa18.87■□□□□ 0.61
SREK1-216ENST00000612404 INPP5FQ9Y2H2 1132 aa18.87■□□□□ 0.61
SREK1-216ENST00000612404 NUB1Q9Y5A7 615 aa18.87■□□□□ 0.61
SREK1-216ENST00000612404 EOMESO95936 686 aa18.86■□□□□ 0.61
SREK1-216ENST00000612404 PNMA6AP0CW24 399 aaPredicted RBP18.86■□□□□ 0.61
SREK1-216ENST00000612404 SCNN1GP51170 649 aa18.86■□□□□ 0.61
SREK1-216ENST00000612404 JAM2P57087 298 aa18.86■□□□□ 0.61
SREK1-216ENST00000612404 FAM189BP81408 668 aa18.86■□□□□ 0.61
SREK1-216ENST00000612404 RBP5P82980 135 aa18.86■□□□□ 0.61
SREK1-216ENST00000612404 E4F1Q66K89 784 aaPredicted RBP18.86■□□□□ 0.61
SREK1-216ENST00000612404 ZNF598Q86UK7 904 aaKnown RBP18.86■□□□□ 0.61
SREK1-216ENST00000612404 F8VZ95 297 aa18.86■□□□□ 0.61
SREK1-216ENST00000612404 THP07101 528 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms