RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 PYGMP11217 842 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 RALAP11233 206 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 OAZ1P54368 228 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 PSMC1P62191 440 aaKnown RBP6.77□□□□□ -1.33
SNX13-213ENST00000611725 CENPUQ71F23 418 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 CDR2LQ86X02 465 aaPredicted RBP6.77□□□□□ -1.33
SNX13-213ENST00000611725 RHPN2Q8IUC4 686 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 VPS33BQ9H267 617 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 IP6K2Q9UHH9 426 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 SCN11AQ9UI33 1791 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 PTPRAP18433 802 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 LRRC14Q15048 493 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 ZRSR2Q15696 482 aaKnown RBP6.77□□□□□ -1.33
SNX13-213ENST00000611725 SEZ6Q53EL9 994 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 FAM149B1Q96BN6 582 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 BTBD6Q96KE9 485 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 FAM118BQ9BPY3 351 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 PARVAQ9NVD7 372 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 TXNDC16Q9P2K2 825 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 PCSK1NQ9UHG2 260 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 H7C0C1 242 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 MED7O43513 233 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 CLTAP09496 248 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 HOXD13P35453 343 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 ATP5OP48047 213 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 ZACNQ401N2 412 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 DPY19L2Q6NUT2 758 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 SMC6Q96SB8 1091 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 GMLQ99445 158 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 AKT3Q9Y243 479 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 MCF2LO15068 1137 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 KRT7P08729 469 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 TXNP10599 105 aaKnown RBP6.77□□□□□ -1.33
SNX13-213ENST00000611725 NFX1Q12986 1120 aaKnown RBP6.77□□□□□ -1.33
SNX13-213ENST00000611725 SGSM1Q2NKQ1 1148 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 CD302Q8IX05 232 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 NR2E1Q9Y466 385 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 C5P01031 1676 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 OGTO15294 1046 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 RARAP10276 462 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 NR1H3Q13133 447 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 RFX6Q8HWS3 928 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 GBP7Q8N8V2 638 aaPredicted RBP6.77□□□□□ -1.33
SNX13-213ENST00000611725 SENP7Q9BQF6 1050 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 FOXP3Q9BZS1 431 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 AVENQ9NQS1 362 aaPredicted RBP6.77□□□□□ -1.33
SNX13-213ENST00000611725 NCANO14594 1321 aa6.77□□□□□ -1.33
SNX13-213ENST00000611725 COL14A1Q05707 1796 aaKnown RBP6.77□□□□□ -1.33
SNX13-213ENST00000611725 ZNF862O60290 1169 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 CHN1P15882 459 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 NAMPTP43490 491 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 PHKA2P46019 1235 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 RTP1P59025 263 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 MXD4Q14582 209 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 MCOLN2Q8IZK6 566 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 ABRAQ8N0Z2 381 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 LRRC71Q8N4P6 559 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 MDM1Q8TC05 714 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 LRRC8CQ8TDW0 803 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 PPP1R16BQ96T49 567 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 WRAP73Q9P2S5 460 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 LCMT1Q9UIC8 334 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 ZC3H4Q9UPT8 1303 aaKnown RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 DHX15O43143 795 aaKnown RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 DRG2P55039 364 aaKnown RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 FMO1Q01740 532 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 UGCGQ16739 394 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 ZC3H3Q8IXZ2 948 aaKnown RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 SPATA33Q96N06 139 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 ROPN1BQ9BZX4 212 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 ROPN1Q9HAT0 212 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 MYCNP04198 464 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 ITGA8P53708 1063 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 ARL4CP56559 192 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 JAM2P57087 298 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 CNTN2Q02246 1040 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 STAT4Q14765 748 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 LONRF1Q17RB8 773 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 IER5Q5VY09 327 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 SYDE1Q6ZW31 735 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 ZNF572Q7Z3I7 529 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 PYROXD1Q8WU10 500 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 C7orf43Q8WVR3 580 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 PRPF31Q8WWY3 499 aaKnown RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 HEXIM2Q96MH2 286 aaKnown RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 PCDHB18PQ96TA0 734 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 ZWILCHQ9H900 591 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 TUBGCP6Q96RT7 1819 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 VGLL3A8MV65 326 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 PRPSAP2O60256 369 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 SHOX2O60902 331 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 TROVE2P10155 538 aaKnown RBP eCLIP6.76□□□□□ -1.33
SNX13-213ENST00000611725 TTLL4Q14679 1199 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 CCDC6Q16204 474 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 SPOPLQ6IQ16 392 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 GPAT2Q6NUI2 795 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 TBC1D1Q86TI0 1168 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 ZBED8Q8IZ13 594 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 KREMEN1Q96MU8 473 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 XPNPEP1Q9NQW7 623 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms