RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 LRPAP1P30533 357 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 RPL9P32969 192 aaKnown RBP16.8■□□□□ 0.28
GRIA3-205ENST00000611689 BMPR1AP36894 532 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 OR1G1P47890 313 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 ALDH7A1P49419 539 aaKnown RBP16.8■□□□□ 0.28
GRIA3-205ENST00000611689 AP3M2P53677 418 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 CDKAL1Q5VV42 579 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 FAM114A1Q8IWE2 563 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 TRIM59Q8IWR1 403 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 COLGALT1Q8NBJ5 622 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 DDX27Q96GQ7 796 aaKnown RBP16.8■□□□□ 0.28
GRIA3-205ENST00000611689 ANKRD36BP1Q96IX9 119 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 UROC1Q96N76 676 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 ZNF558Q96NG5 402 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 PAAF1Q9BRP4 392 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 MTMR12Q9C0I1 747 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 AAASQ9NRG9 546 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
GRIA3-205ENST00000611689 NT5C1B-RDH14C9J2C7 533 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 TNNC2P02585 160 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 C4BPAP04003 597 aaKnown RBP16.79■□□□□ 0.28
GRIA3-205ENST00000611689 PBX3P40426 434 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 CLCNKBP51801 687 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 PPP3CAQ08209 521 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 UPP1Q16831 310 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 HSP90AA4PQ58FG1 418 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 TCERG1LQ5VWI1 586 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 C9orf57Q5W0N0 161 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 PPP2R2DQ66LE6 453 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 TRAPPC11Q7Z392 1133 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 SPRED2Q7Z698 418 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 C1orf127Q8N9H9 656 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 CXorf38Q8TB03 319 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 FAM200AQ8TCP9 573 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 RABGGTAQ92696 567 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 SLC35C1Q96A29 364 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 TIFAQ96CG3 184 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 TGS1Q96RS0 853 aaKnown RBP16.79■□□□□ 0.28
GRIA3-205ENST00000611689 C17orf80Q9BSJ5 609 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 HSD3B7Q9H2F3 369 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 SLC28A3Q9HAS3 691 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 RWDD3Q9Y3V2 267 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 PCDHB12Q9Y5F1 795 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 CITO14578 2027 aa16.79■□□□□ 0.28
GRIA3-205ENST00000611689 RALGAPA2Q2PPJ7 1873 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 ANO9A1A5B4 782 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 CARNS1A5YM72 827 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 BECN2A8MW95 431 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 KCNJ18B7U540 433 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 F8W810 466 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 SOX1O00570 391 aaPredicted RBP16.78■□□□□ 0.28
GRIA3-205ENST00000611689 PODXLO00592 558 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 STX10O60499 249 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 IGFBP6P24592 240 aaPredicted RBP16.78■□□□□ 0.28
GRIA3-205ENST00000611689 GTF2H1P32780 548 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 GCLMP48507 274 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 ERVK-21P61565 698 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 KCNJ12Q14500 433 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 DCAF17Q5H9S7 520 aaPredicted RBP16.78■□□□□ 0.28
GRIA3-205ENST00000611689 SCARA3Q6AZY7 606 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 DCLRE1AQ6PJP8 1040 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 C15orf39Q6ZRI6 1047 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 SV2AQ7L0J3 742 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 CREBRFQ8IUR6 639 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 SLC39A11Q8N1S5 342 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 SAMD11Q96NU1 681 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 COLEC11Q9BWP8 271 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 MAGEC2Q9UBF1 373 aaPredicted RBP16.78■□□□□ 0.28
GRIA3-205ENST00000611689 SIX4Q9UIU6 781 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 ITGA11Q9UKX5 1188 aa16.78■□□□□ 0.28
GRIA3-205ENST00000611689 PRG3Q9Y2Y8 225 aaPredicted RBP16.78■□□□□ 0.28
GRIA3-205ENST00000611689 PIRO00625 290 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 PPEF2O14830 753 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 ITGB3P05106 788 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 ZNF18P17022 549 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 EEF1GP26641 437 aaKnown RBP16.77■□□□□ 0.28
GRIA3-205ENST00000611689 CTNNB1P35222 781 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.28
GRIA3-205ENST00000611689 ZACNQ401N2 412 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 EPC2Q52LR7 807 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 TCP11X2Q5H9J9 407 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 TDRD10Q5VZ19 366 aaKnown RBP16.77■□□□□ 0.28
GRIA3-205ENST00000611689 CD300LGQ6UXG3 332 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 LUZP1Q86V48 1076 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 TMEM173Q86WV6 379 aaPredicted RBP16.77■□□□□ 0.28
GRIA3-205ENST00000611689 C3orf58Q8NDZ4 430 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 BCL7CQ8WUZ0 217 aaPredicted RBP16.77■□□□□ 0.28
GRIA3-205ENST00000611689 IGSF21Q96ID5 467 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 ANP32EQ9BTT0 268 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 PLVAPQ9BX97 442 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 TMEM8AQ9HCN3 771 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 MARCH5Q9NX47 278 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 SPG21Q9NZD8 308 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 MTUS1Q9ULD2 1270 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 AGAP1Q9UPQ3 857 aa16.77■□□□□ 0.28
GRIA3-205ENST00000611689 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.77■□□□□ 0.28
GRIA3-205ENST00000611689 ANK1P16157 1881 aa16.77■□□□□ 0.27
GRIA3-205ENST00000611689 C5orf67F2Z3F1 127 aa16.76■□□□□ 0.27
GRIA3-205ENST00000611689 TMEM189-UBE2V1I3L0A0 370 aa16.76■□□□□ 0.27
GRIA3-205ENST00000611689 B3GAT3O94766 335 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms