RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 FAXDC2Q96IV6 333 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 FZD8Q9H461 694 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 LCMT1Q9UIC8 334 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 MTUS1Q9ULD2 1270 aa12.79□□□□□ -0.36
USP6NL-206ENST00000609853 PTPRJQ12913 1337 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 RBM47A0AV96 593 aaKnown RBP12.78□□□□□ -0.36
USP6NL-206ENST00000609853 ASS1P00966 412 aaKnown RBP12.78□□□□□ -0.36
USP6NL-206ENST00000609853 SRGAP2CP0DJJ0 459 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 ITGA4P13612 1032 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 MARK3P27448 753 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 CHRNA3P32297 505 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 HSPA9P38646 679 aaKnown RBP12.78□□□□□ -0.36
USP6NL-206ENST00000609853 GTF2A2P52657 109 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 DRG2P55039 364 aaKnown RBP12.78□□□□□ -0.36
USP6NL-206ENST00000609853 RWDD2BP57060 319 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 FKBP1BP68106 108 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 DRP2Q13474 957 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 PTPROQ16827 1216 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 SGSM1Q2NKQ1 1148 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 CFAP58Q5T655 872 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 MPZL3Q6UWV2 235 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 ARMCX2Q7L311 632 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 CD302Q8IX05 232 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 IQCKQ8N0W5 287 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 HINFPQ9BQA5 517 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 MRPL47Q9HD33 250 aaKnown RBP12.78□□□□□ -0.36
USP6NL-206ENST00000609853 ACP6Q9NPH0 428 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 RASAL2Q9UJF2 1139 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 CPSF3Q9UKF6 684 aaKnown RBP12.78□□□□□ -0.36
USP6NL-206ENST00000609853 PCDHB4Q9Y5E5 795 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 COL1A2P08123 1366 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 PLXNB2O15031 1838 aa12.78□□□□□ -0.36
USP6NL-206ENST00000609853 ESYT3A0FGR9 886 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 A6NNZ2 444 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 PODXLO00592 558 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 PHF2O75151 1096 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 IL18RAPO95256 599 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 GH1P01241 217 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 EDN1P05305 212 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 GNA15P30679 374 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 GJA5P36382 358 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 WNT7BP56706 349 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 YWHAEP62258 255 aaKnown RBP12.77□□□□□ -0.36
USP6NL-206ENST00000609853 DR1Q01658 176 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 MTMR3Q13615 1198 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 HLTFQ14527 1009 aaKnown RBP eCLIP12.77□□□□□ -0.36
USP6NL-206ENST00000609853 FAM187BQ17R55 369 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 ZNF792Q3KQV3 632 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 TUBB8Q3ZCM7 444 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 SPDYCQ5MJ68 293 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.36
USP6NL-206ENST00000609853 MAIP1Q8WWC4 291 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 R3HDMLQ9H3Y0 253 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 APOBEC3GQ9HC16 384 aaKnown RBP12.77□□□□□ -0.36
USP6NL-206ENST00000609853 PTPRHQ9HD43 1115 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 PRMT7Q9NVM4 692 aaPredicted RBP12.77□□□□□ -0.36
USP6NL-206ENST00000609853 PCYOX1Q9UHG3 505 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 AMACRQ9UHK6 382 aa12.77□□□□□ -0.36
USP6NL-206ENST00000609853 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.77□□□□□ -0.36
USP6NL-206ENST00000609853 ZSWIM8A7E2V4 1837 aa12.77□□□□□ -0.37
USP6NL-206ENST00000609853 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
USP6NL-206ENST00000609853 ABLIM1O14639 778 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 B4GALT4O60513 344 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 ABCB7O75027 752 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 ERLIN2O94905 339 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 LSM8O95777 96 aaKnown RBP12.76□□□□□ -0.37
USP6NL-206ENST00000609853 MAPK4P31152 587 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 PHKA2P46019 1235 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 ZNF132P52740 706 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 CYP1B1Q16678 543 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 KYAT1Q16773 422 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 EAPPQ56P03 285 aaPredicted RBP12.76□□□□□ -0.37
USP6NL-206ENST00000609853 ZBTB41Q5SVQ8 909 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 ATF7IP2Q5U623 682 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 EFCAB12Q6NXP0 572 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 TMEM270Q6UE05 265 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 LRIG3Q6UXM1 1119 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 TRIM50Q86XT4 487 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 PHF13Q86YI8 300 aaPredicted RBP12.76□□□□□ -0.37
USP6NL-206ENST00000609853 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
USP6NL-206ENST00000609853 RHPN2Q8IUC4 686 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 UBR7Q8N806 425 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 OR5B17Q8NGF7 314 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 PPTC7Q8NI37 304 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 FAM129AQ9BZQ8 928 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 MORF4L1Q9UBU8 362 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 TNFSF13BQ9Y275 285 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 NUB1Q9Y5A7 615 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 SCINQ9Y6U3 715 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 EVPLQ92817 2033 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 UTRNP46939 3433 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 GOLGA6CA6NDK9 693 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 TMEM110-MUSTN1A8MSY1 372 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 MYO1FO00160 1098 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 TNNC2P02585 160 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 FAM153BP0C7A2 387 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 GOLGA6DP0CG33 693 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 TNFAIP2Q03169 654 aa12.76□□□□□ -0.37
USP6NL-206ENST00000609853 ARHGAP1Q07960 439 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms