RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 GUCY2CP25092 1073 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 CREMQ03060 361 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 LMNB2Q03252 620 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 PRKCQQ04759 706 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 SLC39A14Q15043 492 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 SEZ6Q53EL9 994 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 RSPO2Q6UXX9 243 aaPredicted RBP14.93□□□□□ -0.02
CTSA-218ENST00000607814 COLGALT2Q8IYK4 626 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 ATRIPQ8WXE1 791 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 RAD54LQ92698 747 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 ZBTB45Q96K62 511 aaPredicted RBP14.93□□□□□ -0.02
CTSA-218ENST00000607814 PRIMPOLQ96LW4 560 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 DRC1Q96MC2 740 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 REEP2Q9BRK0 252 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 FOXQ1Q9C009 403 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 FNIP2Q9P278 1114 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 GIT1Q9Y2X7 761 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 MIA3Q5JRA6 1907 aa14.93□□□□□ -0.02
CTSA-218ENST00000607814 A0A087X0B3 334 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 RECQL4O94761 1208 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 KRT18P05783 430 aaKnown RBP14.92□□□□□ -0.02
CTSA-218ENST00000607814 ZSCAN22P10073 491 aaPredicted RBP14.92□□□□□ -0.02
CTSA-218ENST00000607814 MYBP10242 640 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 PLS3P13797 630 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 IGFBP6P24592 240 aaPredicted RBP14.92□□□□□ -0.02
CTSA-218ENST00000607814 EFNA5P52803 228 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 ATXN1P54253 815 aaKnown RBP14.92□□□□□ -0.02
CTSA-218ENST00000607814 DSC1Q08554 894 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 STK38Q15208 465 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 GLRA4Q5JXX5 417 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 MTSS1LQ765P7 747 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 GET4Q7L5D6 327 aaPredicted RBP14.92□□□□□ -0.02
CTSA-218ENST00000607814 PDILTQ8N807 584 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 ZBTB44Q8NCP5 570 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 B3GALT6Q96L58 329 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 ACO2Q99798 780 aaKnown RBP14.92□□□□□ -0.02
CTSA-218ENST00000607814 PAAF1Q9BRP4 392 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 CCSER1Q9C0I3 900 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 SPATA6Q9NWH7 488 aaPredicted RBP14.92□□□□□ -0.02
CTSA-218ENST00000607814 ARHGAP28Q9P2N2 729 aa14.92□□□□□ -0.02
CTSA-218ENST00000607814 CASTOR2A6NHX0 329 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 TGM5O43548 720 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 DDIT3P35638 169 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 PFKPQ01813 784 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 LILRA6Q6PI73 481 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 DYMQ7RTS9 669 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 TMEM130Q8N3G9 435 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 MYCT1Q8N699 235 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 KRI1Q8N9T8 703 aaKnown RBP14.91□□□□□ -0.02
CTSA-218ENST00000607814 LINC00301Q8NCQ3 95 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 TMEM161BQ8NDZ6 487 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 HASPINQ8TF76 798 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 ADPGKQ9BRR6 497 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 RTKNQ9BST9 563 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 TCHPQ9BT92 498 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 EPC1Q9H2F5 836 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 ZSCAN32Q9NX65 697 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 CDV3Q9UKY7 258 aaKnown RBP14.91□□□□□ -0.02
CTSA-218ENST00000607814 PHLPP2Q6ZVD8 1323 aa14.91□□□□□ -0.02
CTSA-218ENST00000607814 PTGESO14684 152 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 ZMYND10O75800 440 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 FAM13AO94988 1023 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 F13A1P00488 732 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 FSHRP23945 695 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 NMT1P30419 496 aaKnown RBP14.9□□□□□ -0.02
CTSA-218ENST00000607814 NASPP49321 788 aaPredicted RBP14.9□□□□□ -0.02
CTSA-218ENST00000607814 GPC5P78333 572 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 MLF2Q15773 248 aaPredicted RBP14.9□□□□□ -0.02
CTSA-218ENST00000607814 USP41Q3LFD5 358 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 RRAGBQ5VZM2 374 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 PALB2Q86YC2 1186 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 HACE1Q8IYU2 909 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 LARP4BQ92615 738 aaKnown RBP14.9□□□□□ -0.02
CTSA-218ENST00000607814 NELL1Q92832 810 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 NELL2Q99435 816 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 NTPCRQ9BSD7 190 aaKnown RBP14.9□□□□□ -0.02
CTSA-218ENST00000607814 COLEC11Q9BWP8 271 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 MRPL4Q9BYD3 311 aaKnown RBP14.9□□□□□ -0.02
CTSA-218ENST00000607814 FAM126AQ9BYI3 521 aaPredicted RBP14.9□□□□□ -0.02
CTSA-218ENST00000607814 CDT1Q9H211 546 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 IKZF4Q9H2S9 585 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 TMEM134Q9H6X4 195 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 PTPRHQ9HD43 1115 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 ANKFY1Q9P2R3 1169 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 CDH7Q9ULB5 785 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 TNFSF13BQ9Y275 285 aa14.9□□□□□ -0.02
CTSA-218ENST00000607814 PATJQ8NI35 1801 aa14.89□□□□□ -0.03
CTSA-218ENST00000607814 MYMKA6NI61 221 aa14.89□□□□□ -0.03
CTSA-218ENST00000607814 SPTLC2O15270 562 aa14.89□□□□□ -0.03
CTSA-218ENST00000607814 TBC1D4O60343 1298 aa14.89□□□□□ -0.03
CTSA-218ENST00000607814 LILRB5O75023 590 aa14.89□□□□□ -0.03
CTSA-218ENST00000607814 HNRNPA1P09651 372 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTSA-218ENST00000607814 SPATA31D3P0C874 917 aa14.89□□□□□ -0.03
CTSA-218ENST00000607814 MAPTP10636 758 aaKnown RBP14.89□□□□□ -0.03
CTSA-218ENST00000607814 SMTNP53814 917 aa14.89□□□□□ -0.03
CTSA-218ENST00000607814 DNM1Q05193 864 aaKnown RBP14.89□□□□□ -0.03
CTSA-218ENST00000607814 SNW1Q13573 536 aaKnown RBP14.89□□□□□ -0.03
CTSA-218ENST00000607814 ZNF568Q3ZCX4 644 aa14.89□□□□□ -0.03
CTSA-218ENST00000607814 SLC44A4Q53GD3 710 aa14.89□□□□□ -0.03
CTSA-218ENST00000607814 SPATA31D4Q6ZUB0 917 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms