RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 FUT10Q6P4F1 479 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 SYCE2Q6PIF2 218 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 ZNF720Q7Z2F6 126 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 SFR1Q86XK3 245 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 PDILTQ8N807 584 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 TMEM87AQ8NBN3 555 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 RABGGTAQ92696 567 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 CASP10Q92851 521 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 BICD1Q96G01 975 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 SNX27Q96L92 541 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 MRPL17Q9NRX2 175 aaKnown RBP10.9□□□□□ -0.66
CTSA-215ENST00000607187 SEL1LQ9UBV2 794 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 PRKAG3Q9UGI9 489 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 RCOR1Q9UKL0 485 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 PCDHA7Q9UN72 937 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 SSX2IPQ9Y2D8 614 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 C2orf16Q68DN1 1984 aa10.9□□□□□ -0.66
CTSA-215ENST00000607187 MYO10Q9HD67 2058 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 TADA2AO75478 443 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 KIF4AO95239 1232 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 HARSP12081 509 aaKnown RBP10.89□□□□□ -0.67
CTSA-215ENST00000607187 HOXB8P17481 243 aaPredicted RBP10.89□□□□□ -0.67
CTSA-215ENST00000607187 ME1P48163 572 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 GLUD2P49448 558 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 LIG4P49917 911 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 UPP1Q16831 310 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 SLC10A6Q3KNW5 377 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 USP41Q3LFD5 358 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 ZC2HC1CQ53FD0 456 aaPredicted RBP10.89□□□□□ -0.67
CTSA-215ENST00000607187 PPFIBP1Q86W92 1011 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 MAP4K3Q8IVH8 894 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 GPR65Q8IYL9 337 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 IQUBQ8NA54 791 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 SLC22A17Q8WUG5 538 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 SUSD6Q92537 303 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 ZMAT2Q96NC0 199 aaKnown RBP10.89□□□□□ -0.67
CTSA-215ENST00000607187 KLHL5Q96PQ7 755 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 STRA6Q9BX79 667 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 EMILIN2Q9BXX0 1053 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 S1PR5Q9H228 398 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 TNMDQ9H2S6 317 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 CUEDC2Q9H467 287 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 RXFP1Q9HBX9 757 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 CD320Q9NPF0 282 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 OLFML3Q9NRN5 406 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 SLC38A7Q9NVC3 462 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 KBTBD4Q9NVX7 518 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 CNTN3Q9P232 1028 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 DOCK6Q96HP0 2047 aa10.89□□□□□ -0.67
CTSA-215ENST00000607187 SF3B1O75533 1304 aaKnown RBP eCLIP10.88□□□□□ -0.67
CTSA-215ENST00000607187 A0A0B4J269 797 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 TMEM189-UBE2V1I3L0A0 370 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 C2CD2LO14523 706 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 FAM189A1O60320 539 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 CLTAP09496 248 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 EPCAMP16422 314 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 IGFBP6P24592 240 aaPredicted RBP10.88□□□□□ -0.67
CTSA-215ENST00000607187 MATR3P43243 847 aaKnown RBP eCLIP10.88□□□□□ -0.67
CTSA-215ENST00000607187 CLCN4P51793 760 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 CLCNKBP51801 687 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 ZP2Q05996 745 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 SOX4Q06945 474 aaPredicted RBP10.88□□□□□ -0.67
CTSA-215ENST00000607187 BECN1Q14457 450 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 SEZ6Q53EL9 994 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 RESP18Q5W5W9 173 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 KIAA1841Q6NSI8 718 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 SLC39A4Q6P5W5 647 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 DCLRE1AQ6PJP8 1040 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 ADHFE1Q8IWW8 467 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 HASPINQ8TF76 798 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 DHX58Q96C10 678 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 HVCN1Q96D96 273 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 B3GALT6Q96L58 329 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 UROC1Q96N76 676 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 LRRC27Q9C0I9 530 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 MRPL44Q9H9J2 332 aaKnown RBP10.88□□□□□ -0.67
CTSA-215ENST00000607187 PLEKHA5Q9HAU0 1116 aa10.88□□□□□ -0.67
CTSA-215ENST00000607187 USP15Q9Y4E8 981 aaPredicted RBP10.88□□□□□ -0.67
CTSA-215ENST00000607187 TTC26A0AVF1 554 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 ANKRD63C9JTQ0 380 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 OGTO15294 1046 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 TEX28O15482 410 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 POLR2DO15514 142 aaKnown RBP10.87□□□□□ -0.67
CTSA-215ENST00000607187 B3GAT3O94766 335 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 ADH1AP07327 375 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 ADRB2P07550 413 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 CXCL8P10145 99 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 IDEP14735 1019 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 KLRC2P26717 231 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 TNFSF9P41273 254 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 CASP5P51878 434 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 KRT85P78386 507 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 AMPD3Q01432 767 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 ELAVL2Q12926 359 aaKnown RBP10.87□□□□□ -0.67
CTSA-215ENST00000607187 NR6A1Q15406 480 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 KYAT1Q16773 422 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 HERC4Q5GLZ8 1057 aaPredicted RBP10.87□□□□□ -0.67
CTSA-215ENST00000607187 RTP2Q5QGT7 225 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 ZBTB41Q5SVQ8 909 aa10.87□□□□□ -0.67
CTSA-215ENST00000607187 SWT1Q5T5J6 900 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms