RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 LNX1Q8TBB1 728 aaPredicted RBP23.2■■□□□ 1.3
USP6NL-204ENST00000606752 DHX38Q92620 1227 aaKnown RBP23.2■■□□□ 1.3
USP6NL-204ENST00000606752 NUB1Q9Y5A7 615 aa23.2■■□□□ 1.3
USP6NL-204ENST00000606752 MACROD2A1Z1Q3 448 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 SGPL1O95470 568 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 NFICP08651 508 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 MYL6P60660 151 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 SCARA3Q6AZY7 606 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 JADE1Q6IE81 842 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 U2AF1L4Q8WU68 220 aaKnown RBP23.19■■□□□ 1.3
USP6NL-204ENST00000606752 ARID3AQ99856 593 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 PLEKHA5Q9HAU0 1116 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 TRPV2Q9Y5S1 764 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 ACLYP53396 1101 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 RNF10Q8N5U6 811 aaKnown RBP23.19■■□□□ 1.3
USP6NL-204ENST00000606752 EPS8L1Q8TE68 723 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 EIF2AQ9BY44 585 aaKnown RBP23.19■■□□□ 1.3
USP6NL-204ENST00000606752 L2HGDHQ9H9P8 463 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 NOCTQ9UK39 431 aaKnown RBP23.19■■□□□ 1.3
USP6NL-204ENST00000606752 PIN4Q9Y237 131 aaKnown RBP23.19■■□□□ 1.3
USP6NL-204ENST00000606752 CDY2AQ9Y6F7 541 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 ATP8B3O60423 1300 aa23.19■■□□□ 1.3
USP6NL-204ENST00000606752 CTAGE9A4FU28 777 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 URI1O94763 535 aaPredicted RBP23.18■■□□□ 1.3
USP6NL-204ENST00000606752 KRT5P13647 590 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 ITGA7Q13683 1181 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 LHX8Q68G74 356 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 SLC47A2Q86VL8 602 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 NT5DC4Q86YG4 428 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 MYRIPQ8NFW9 859 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 SLC20A1Q8WUM9 679 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 TSEN34Q9BSV6 310 aaKnown RBP23.18■■□□□ 1.3
USP6NL-204ENST00000606752 PACSIN1Q9BY11 444 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 INTUQ9ULD6 942 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 C2CD2Q9Y426 696 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 TRIM17Q9Y577 477 aa23.18■■□□□ 1.3
USP6NL-204ENST00000606752 MOXD2PA6NHM9 499 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 CYP11B1P15538 503 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 PTGISQ16647 500 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 NOP9Q86U38 636 aaKnown RBP23.17■■□□□ 1.3
USP6NL-204ENST00000606752 TAF4BQ92750 862 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 TRIM6Q9C030 488 aaPredicted RBP23.17■■□□□ 1.3
USP6NL-204ENST00000606752 SNTG2Q9NY99 539 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 PTCH2Q9Y6C5 1203 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 BTNL10A8MVZ5 291 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 TACC1O75410 805 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 CLSTN1O94985 981 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 H2AFZP0C0S5 128 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 ACO1P21399 889 aaKnown RBP23.17■■□□□ 1.3
USP6NL-204ENST00000606752 BPIFB4P59827 614 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 PTPN11Q06124 597 aaPredicted RBP23.17■■□□□ 1.3
USP6NL-204ENST00000606752 TMEM132DQ14C87 1099 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 H2AFVQ71UI9 128 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 FAM228AQ86W67 206 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 RPUSD2Q8IZ73 545 aaKnown RBP23.17■■□□□ 1.3
USP6NL-204ENST00000606752 C1orf127Q8N9H9 656 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 TRIM58Q8NG06 486 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 WNT8BQ93098 351 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 NAPGQ99747 312 aaPredicted RBP23.17■■□□□ 1.3
USP6NL-204ENST00000606752 XYLT2Q9H1B5 865 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 SIX4Q9UIU6 781 aa23.17■■□□□ 1.3
USP6NL-204ENST00000606752 NOC2LQ9Y3T9 749 aaKnown RBP23.17■■□□□ 1.3
USP6NL-204ENST00000606752 PDE6CP51160 858 aa23.16■■□□□ 1.3
USP6NL-204ENST00000606752 YARSP54577 528 aaKnown RBP23.16■■□□□ 1.3
USP6NL-204ENST00000606752 ZNF699Q32M78 642 aa23.16■■□□□ 1.3
USP6NL-204ENST00000606752 UMODL1Q5DID0 1318 aa23.16■■□□□ 1.3
USP6NL-204ENST00000606752 SEPT11Q9NVA2 429 aaKnown RBP23.16■■□□□ 1.3
USP6NL-204ENST00000606752 SALL4Q9UJQ4 1053 aa23.16■■□□□ 1.3
USP6NL-204ENST00000606752 CNTN6Q9UQ52 1028 aa23.16■■□□□ 1.3
USP6NL-204ENST00000606752 HTTP42858 3142 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 CHRNA1P02708 482 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 CHRNB2P17787 502 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 SMYD5Q6GMV2 418 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 GLT1D1Q96MS3 346 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 NOX5Q96PH1 765 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 BEGAINQ9BUH8 593 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 SENP6Q9GZR1 1112 aaPredicted RBP23.15■■□□□ 1.3
USP6NL-204ENST00000606752 NIF3L1Q9GZT8 377 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 ACP6Q9NPH0 428 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 DERAQ9Y315 318 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 PCDHB2Q9Y5E7 798 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 MOCS3O95396 460 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 KRT19P08727 400 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 CDR2Q01850 454 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 UBXN11Q5T124 520 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 CXorf38Q8TB03 319 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 FAXDC2Q96IV6 333 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 TSKSQ9UJT2 592 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 PCDHB4Q9Y5E5 795 aa23.15■■□□□ 1.3
USP6NL-204ENST00000606752 ANK1P16157 1881 aa23.14■■□□□ 1.29
USP6NL-204ENST00000606752 MGAT3Q09327 533 aa23.14■■□□□ 1.29
USP6NL-204ENST00000606752 PTK7Q13308 1070 aa23.14■■□□□ 1.29
USP6NL-204ENST00000606752 TAF3Q5VWG9 929 aa23.14■■□□□ 1.29
USP6NL-204ENST00000606752 DDX1Q92499 740 aaKnown RBP23.14■■□□□ 1.29
USP6NL-204ENST00000606752 KIF12Q96FN5 646 aa23.14■■□□□ 1.29
USP6NL-204ENST00000606752 SNX27Q96L92 541 aa23.14■■□□□ 1.29
USP6NL-204ENST00000606752 NXF3Q9H4D5 531 aaKnown RBP23.14■■□□□ 1.29
USP6NL-204ENST00000606752 HES2Q9Y543 173 aa23.14■■□□□ 1.29
USP6NL-204ENST00000606752 CAPN6Q9Y6Q1 641 aa23.14■■□□□ 1.29
USP6NL-204ENST00000606752 RPS6KA5O75582 802 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms