RNA–Protein interactions for RNA: ENST00000605961.1

LMO7-227, Transcript of LIM domain 7, humanhuman

Gene LMO7, Length 2,039 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-227ENST00000605961 VAMP7P51809 220 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 AP3M2P53677 418 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 SOX4Q06945 474 aaPredicted RBP8.49□□□□□ -1.05
LMO7-227ENST00000605961 NAB2Q15742 525 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 ZBTB6Q15916 424 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 ZSCAN23Q3MJ62 389 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 LMBRD2Q68DH5 695 aaPredicted RBP8.49□□□□□ -1.05
LMO7-227ENST00000605961 WDR49Q8IV35 697 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 ZC3H3Q8IXZ2 948 aaKnown RBP8.49□□□□□ -1.05
LMO7-227ENST00000605961 KLHL23Q8NBE8 558 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 RABGGTAQ92696 567 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 IGSF21Q96ID5 467 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 DNAJC25Q9H1X3 360 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 GOLGA2P5Q9HBQ8 144 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 METTL14Q9HCE5 456 aaKnown RBP8.49□□□□□ -1.05
LMO7-227ENST00000605961 MAGEC2Q9UBF1 373 aaPredicted RBP8.49□□□□□ -1.05
LMO7-227ENST00000605961 ARMCX3Q9UH62 379 aaPredicted RBP8.49□□□□□ -1.05
LMO7-227ENST00000605961 NUB1Q9Y5A7 615 aa8.49□□□□□ -1.05
LMO7-227ENST00000605961 COL4A6Q14031 1691 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 FNDC1Q4ZHG4 1894 aaPredicted RBP8.48□□□□□ -1.05
LMO7-227ENST00000605961 C5orf67F2Z3F1 127 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 STX10O60499 249 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 B4GALT3O60512 393 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 B3GAT3O94766 335 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 CLSTN1O94985 981 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 KRT19P08727 400 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 CLCNKBP51801 687 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 GUCY2FP51841 1108 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 RBP5P82980 135 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 PLCB3Q01970 1234 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 BMS1Q14692 1282 aaKnown RBP8.48□□□□□ -1.05
LMO7-227ENST00000605961 UPP1Q16831 310 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 ANO6Q4KMQ2 910 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 TCERG1LQ5VWI1 586 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 SPRED2Q7Z698 418 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 FRMD5Q7Z6J6 570 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 FAM114A1Q8IWE2 563 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 EFCAB13Q8IY85 973 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 SLC39A11Q8N1S5 342 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 PARD3BQ8TEW8 1205 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 FAM161BQ96MY7 647 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 POP1Q99575 1024 aaKnown RBP8.48□□□□□ -1.05
LMO7-227ENST00000605961 GZF1Q9H116 711 aaPredicted RBP8.48□□□□□ -1.05
LMO7-227ENST00000605961 CACNG4Q9UBN1 327 aa8.48□□□□□ -1.05
LMO7-227ENST00000605961 LRRIQ3A6PVS8 624 aaPredicted RBP8.47□□□□□ -1.05
LMO7-227ENST00000605961 H3BNC9 293 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 TRAPPC3O43617 180 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 LPXNO60711 386 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 LINC00271P0C7V0 271 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 LRPAP1P30533 357 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 WNT7BP56706 349 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 UBE3AQ05086 875 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 ENPEPQ07075 957 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 BFSP1Q12934 665 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 BIRC3Q13489 604 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 TRPC3Q13507 836 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 PTPROQ16827 1216 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 C9orf57Q5W0N0 161 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 C11orf57Q6ZUT1 292 aaPredicted RBP8.47□□□□□ -1.05
LMO7-227ENST00000605961 OR5B17Q8NGF7 314 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 ENOX1Q8TC92 643 aaKnown RBP8.47□□□□□ -1.05
LMO7-227ENST00000605961 MICAL1Q8TDZ2 1067 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 PAAF1Q9BRP4 392 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 MTMR12Q9C0I1 747 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 TTYH1Q9H313 450 aaPredicted RBP8.47□□□□□ -1.05
LMO7-227ENST00000605961 PRDM12Q9H4Q4 367 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 THAP9Q9H5L6 903 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 MMRN2Q9H8L6 949 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 ALG13Q9NP73 1137 aaKnown RBP8.47□□□□□ -1.05
LMO7-227ENST00000605961 STK39Q9UEW8 545 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 ADAM28Q9UKQ2 775 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 ITGA11Q9UKX5 1188 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 AGAP1Q9UPQ3 857 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 SMTNL1A8MU46 457 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 RFXAPO00287 272 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 IKBKBO14920 756 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 ITGB3P05106 788 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 ITGB1P05556 798 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 TRIM49P0CI25 452 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 TRIM49CP0CI26 452 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 PAX3P23760 479 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 POLR2BP30876 1174 aaKnown RBP8.47□□□□□ -1.05
LMO7-227ENST00000605961 CA8P35219 290 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 ELAVL2Q12926 359 aaKnown RBP8.47□□□□□ -1.05
LMO7-227ENST00000605961 GRIN2CQ14957 1233 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 DCAF17Q5H9S7 520 aaPredicted RBP8.47□□□□□ -1.05
LMO7-227ENST00000605961 KIAA1841Q6NSI8 718 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 DSTYKQ6XUX3 929 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 TRAPPC11Q7Z392 1133 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 DDX53Q86TM3 631 aaKnown RBP8.47□□□□□ -1.05
LMO7-227ENST00000605961 SPPL3Q8TCT6 385 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 PLEKHO2Q8TD55 490 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 HASPINQ8TF76 798 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 GDPD5Q8WTR4 605 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 POF1BQ8WVV4 589 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 ZNF560Q96MR9 790 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 LMAN2LQ9H0V9 348 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 MARCH5Q9NX47 278 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 LZTS1Q9Y250 596 aa8.47□□□□□ -1.05
LMO7-227ENST00000605961 SF3B1O75533 1304 aaKnown RBP eCLIP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms