RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 KIF28PB7ZC32 967 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 HRKO00198 91 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CYP27B1O15528 508 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 GRIN3BO60391 1043 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 HIP1RO75146 1068 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 BMP15O95972 392 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 OAS1P00973 400 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 MPOP05164 745 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 MYL1P05976 194 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CLTAP09496 248 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 SRGNP10124 158 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 PIM1P11309 404 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCNB1P14635 433 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 IDEP14735 1019 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CPA3P15088 417 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 RAG1P15918 1043 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 RPL13P26373 211 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 MARCKSP29966 332 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 RANBP1P43487 201 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 KIR2DL1P43626 348 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 KIR2DL2P43627 348 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CARSP49589 748 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 EPHB3P54753 998 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 DRG2P55039 364 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 NCALDP61601 193 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 PHEXP78562 749 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 LACTBP83111 547 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 OCRLQ01968 901 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 C2orf54Q08AI8 447 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 KCNA1Q09470 495 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 ADAM9Q13443 819 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 LSAMPQ13449 338 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 IDI1Q13907 227 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 TAF11Q15544 211 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 TAF1CQ15572 869 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZRSR2Q15696 482 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 GSTA3Q16772 222 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 MTHFSDQ2M296 383 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 GNPTABQ3T906 1256 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 TNFAIP8L3Q5GJ75 292 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMEM201Q5SNT2 666 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 SNAP47Q5SQN1 464 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 KCTD16Q68DU8 428 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 C8orf74Q6P047 294 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CNKSR3Q6P9H4 555 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 BTNL9Q6UXG8 535 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 BNC2Q6ZN30 1099 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 NLRX1Q86UT6 975 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCDC84Q86UT8 332 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 ERICH1Q86X53 443 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 KBTBD3Q8NAB2 608 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 LINS1Q8NG48 757 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CXorf38Q8TB03 319 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 FEZF2Q8TBJ5 459 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CAGE1Q8TC20 777 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 SCFD2Q8WU76 684 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAIP1Q8WWC4 291 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 LINC01599Q8WXQ3 324 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 RSPH1Q8WYR4 309 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 WASF1Q92558 559 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 KIFAP3Q92845 792 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 PTPRN2Q92932 1015 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 PGM2Q96G03 612 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAP6Q96JE9 813 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAML3Q96JK9 1138 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 RMDN2Q96LZ7 410 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 RAB3IPQ96QF0 476 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 NR1H4Q96RI1 486 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 ERGIC2Q96RQ1 377 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 SEC62Q99442 399 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 NUP88Q99567 741 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 SYT15Q9BQS2 421 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 MTA3Q9BTC8 594 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 NOC4LQ9BVI4 516 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 TIPINQ9BVW5 301 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 TXLNGYQ9BZA5 131 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 TRIM4Q9C037 500 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 KRT23Q9C075 422 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 UBA5Q9GZZ9 404 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 FOXP1Q9H334 677 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 BOLA2Q9H3K6 86 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 MMADHCQ9H3L0 296 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 RNPEPL1Q9HAU8 725 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 PCDH18Q9HCL0 1135 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CRTAC1Q9NQ79 661 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 COPRSQ9NQ92 184 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 ADAM22Q9P0K1 906 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 LARSQ9P2J5 1176 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 CNOT7Q9UIV1 285 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 PLAAQ9Y263 795 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 TBC1D30Q9Y2I9 924 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 L3MBTL1Q9Y468 752 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 NALCNQ8IZF0 1738 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 PARP4Q9UKK3 1724 aaKnown RBP4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 MROH7Q68CQ1 1323 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 NID2Q14112 1375 aa4.4□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF609O15014 1411 aa4.39□□□□□ -1.71
HMGB1P50-201ENST00000605814 POGZQ7Z3K3 1410 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms