RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 BEST2Q8NFU1 509 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 LEO1Q8WVC0 666 aaPredicted RBP12.56□□□□□ -0.4
CCDC12-209ENST00000604164 CCDC34Q96HJ3 373 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 ZMAT2Q96NC0 199 aaKnown RBP12.56□□□□□ -0.4
CCDC12-209ENST00000604164 OXCT2Q9BYC2 517 aaPredicted RBP12.56□□□□□ -0.4
CCDC12-209ENST00000604164 RHOBTB2Q9BYZ6 727 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 MAN1C1Q9NR34 630 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 ZDHHC7Q9NXF8 308 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 TBC1D7Q9P0N9 293 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 CACNG4Q9UBN1 327 aa12.56□□□□□ -0.4
CCDC12-209ENST00000604164 CPSF3Q9UKF6 684 aaKnown RBP12.56□□□□□ -0.4
CCDC12-209ENST00000604164 PVALEFA0A1B0GWK0 134 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 LACTBL1A8MY62 500 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 LOC730098B7Z3J9 87 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 EIF3DO15371 548 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCDC12-209ENST00000604164 FAM189A1O60320 539 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 SLFN14P0C7P3 912 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 LRPAP1P30533 357 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 MCM4P33991 863 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 SNRPFP62306 86 aaKnown RBP12.55□□□□□ -0.4
CCDC12-209ENST00000604164 SOX4Q06945 474 aaPredicted RBP12.55□□□□□ -0.4
CCDC12-209ENST00000604164 TMEM132DQ14C87 1099 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 ENOX2Q16206 610 aaKnown RBP12.55□□□□□ -0.4
CCDC12-209ENST00000604164 LIN9Q5TKA1 542 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 SLC39A4Q6P5W5 647 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 GPR149Q86SP6 731 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 NT5DC4Q86YG4 428 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 LNX1Q8TBB1 728 aaPredicted RBP12.55□□□□□ -0.4
CCDC12-209ENST00000604164 C18orf25Q96B23 403 aaPredicted RBP12.55□□□□□ -0.4
CCDC12-209ENST00000604164 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 B3GALT6Q96L58 329 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 APOL5Q9BWW9 433 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 HAPLN2Q9GZV7 340 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 GOLGA2P5Q9HBQ8 144 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 C2CD2Q9Y426 696 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 BACE2Q9Y5Z0 518 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 UBE4BO95155 1302 aa12.55□□□□□ -0.4
CCDC12-209ENST00000604164 CITO14578 2027 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 ANKRD63C9JTQ0 380 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 PI4K2BG5E9Z4 385 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 TGM5O43548 720 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 DCXO43602 365 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 MYBP10242 640 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 TNFSF9P41273 254 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 ACOT2P49753 483 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 ZBTB6Q15916 424 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 FAM26FQ5R3K3 315 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 SPATA1Q5VX52 437 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 ARMCX5Q6P1M9 558 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 PRSS55Q6UWB4 352 aaPredicted RBP12.54□□□□□ -0.4
CCDC12-209ENST00000604164 TMC5Q6UXY8 1006 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 UNC13DQ70J99 1090 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 PALB2Q86YC2 1186 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 KREMEN2Q8NCW0 462 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 STAMQ92783 540 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 CCDC47Q96A33 483 aaKnown RBP12.54□□□□□ -0.4
CCDC12-209ENST00000604164 ACSF2Q96CM8 615 aaPredicted RBP12.54□□□□□ -0.4
CCDC12-209ENST00000604164 RPGRIP1Q96KN7 1286 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 SUSD3Q96L08 255 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 KIAA1586Q9HCI6 787 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 MTRRQ9UBK8 725 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 USTQ9Y2C2 406 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 ZDHHC9Q9Y397 364 aa12.54□□□□□ -0.4
CCDC12-209ENST00000604164 CCDC195A0A1B0GUA6 201 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 A0A1W2PQ27 194 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 A0A1W2PQ64 194 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 A0A1W2PQD8 194 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 HNRNPA1P09651 372 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCDC12-209ENST00000604164 PFKFB1P16118 471 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 RPL17P18621 184 aaKnown RBP12.53□□□□□ -0.4
CCDC12-209ENST00000604164 TKTP29401 623 aaKnown RBP12.53□□□□□ -0.4
CCDC12-209ENST00000604164 HOXA9P31269 272 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 CASP5P51878 434 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 RAB33AQ14088 237 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 UVSSAQ2YD98 709 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 JADE1Q6IE81 842 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 LILRA6Q6PI73 481 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 CCDC149Q6ZUS6 474 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 OTOP3Q7RTS5 596 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 RNF135Q8IUD6 432 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 GLYCTKQ8IVS8 523 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 C12orf76Q8N812 135 aaPredicted RBP12.53□□□□□ -0.4
CCDC12-209ENST00000604164 TDRD5Q8NAT2 981 aaKnown RBP12.53□□□□□ -0.4
CCDC12-209ENST00000604164 C3orf58Q8NDZ4 430 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 CACTINQ8WUQ7 758 aaKnown RBP12.53□□□□□ -0.4
CCDC12-209ENST00000604164 CLSTN3Q9BQT9 956 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 FAM213AQ9BRX8 229 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 POMKQ9H5K3 350 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 PIDD1Q9HB75 910 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 CD320Q9NPF0 282 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 CGNQ9P2M7 1197 aaKnown RBP12.53□□□□□ -0.4
CCDC12-209ENST00000604164 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 MAFFQ9ULX9 164 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
CCDC12-209ENST00000604164 TTC28Q96AY4 2481 aa12.52□□□□□ -0.4
CCDC12-209ENST00000604164 GOLGA6L4A6NEF3 574 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 MEFVO15553 781 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms