RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SF3B1O75533 1304 aaKnown RBP eCLIP15.03■□□□□ -0
RNF40-212ENST00000602784 PODXLO00592 558 aa15.03■□□□□ -0
RNF40-212ENST00000602784 FSCN2O14926 492 aa15.03■□□□□ -0
RNF40-212ENST00000602784 B3GAT3O94766 335 aa15.03■□□□□ -0
RNF40-212ENST00000602784 FOSL2P15408 326 aa15.03■□□□□ -0
RNF40-212ENST00000602784 IGFBP4P22692 258 aa15.03■□□□□ -0
RNF40-212ENST00000602784 WNT7BP56706 349 aa15.03■□□□□ -0
RNF40-212ENST00000602784 MCCD1P59942 119 aaPredicted RBP15.03■□□□□ -0
RNF40-212ENST00000602784 FKBP3Q00688 224 aaKnown RBP15.03■□□□□ -0
RNF40-212ENST00000602784 ENPEPQ07075 957 aa15.03■□□□□ -0
RNF40-212ENST00000602784 ELAVL2Q12926 359 aaKnown RBP15.03■□□□□ -0
RNF40-212ENST00000602784 CCDC183Q5T5S1 534 aa15.03■□□□□ -0
RNF40-212ENST00000602784 ANKRD40Q6AI12 368 aa15.03■□□□□ -0
RNF40-212ENST00000602784 ZC3H3Q8IXZ2 948 aaKnown RBP15.03■□□□□ -0
RNF40-212ENST00000602784 EFCAB13Q8IY85 973 aa15.03■□□□□ -0
RNF40-212ENST00000602784 VPS52Q8N1B4 723 aa15.03■□□□□ -0
RNF40-212ENST00000602784 MKNK1Q9BUB5 465 aa15.03■□□□□ -0
RNF40-212ENST00000602784 VN1R3Q9BXE9 311 aa15.03■□□□□ -0
RNF40-212ENST00000602784 GOLGA2P5Q9HBQ8 144 aa15.03■□□□□ -0
RNF40-212ENST00000602784 DPP3Q9NY33 737 aa15.03■□□□□ -0
RNF40-212ENST00000602784 TUBGCP4Q9UGJ1 667 aa15.03■□□□□ -0
RNF40-212ENST00000602784 STXBP5LQ9Y2K9 1186 aa15.03■□□□□ -0
RNF40-212ENST00000602784 IRAK3Q9Y616 596 aa15.03■□□□□ -0
RNF40-212ENST00000602784 PLXNA4Q9HCM2 1894 aa15.03■□□□□ -0
RNF40-212ENST00000602784 ANO9A1A5B4 782 aa15.02■□□□□ -0
RNF40-212ENST00000602784 BICDL2A1A5D9 508 aa15.02■□□□□ -0
RNF40-212ENST00000602784 F8W810 466 aa15.02■□□□□ -0
RNF40-212ENST00000602784 CETN3O15182 167 aa15.02■□□□□ -0
RNF40-212ENST00000602784 TRAPPC3O43617 180 aa15.02■□□□□ -0
RNF40-212ENST00000602784 KIF4AO95239 1232 aa15.02■□□□□ -0
RNF40-212ENST00000602784 SOD2P04179 222 aa15.02■□□□□ -0
RNF40-212ENST00000602784 CTSAP10619 480 aa15.02■□□□□ -0
RNF40-212ENST00000602784 PSMC2P35998 433 aaKnown RBP15.02■□□□□ -0
RNF40-212ENST00000602784 CASP4P49662 377 aa15.02■□□□□ -0
RNF40-212ENST00000602784 PMS1P54277 932 aaKnown RBP15.02■□□□□ -0
RNF40-212ENST00000602784 ERVFC1P60507 584 aa15.02■□□□□ -0
RNF40-212ENST00000602784 CLDN10P78369 228 aa15.02■□□□□ -0
RNF40-212ENST00000602784 TFAMQ00059 246 aaKnown RBP15.02■□□□□ -0
RNF40-212ENST00000602784 DUOXA2Q1HG44 320 aa15.02■□□□□ -0
RNF40-212ENST00000602784 KLHL40Q2TBA0 621 aa15.02■□□□□ -0
RNF40-212ENST00000602784 TIGD5Q53EQ6 642 aa15.02■□□□□ -0
RNF40-212ENST00000602784 CT47A1Q5JQC4 288 aaPredicted RBP15.02■□□□□ -0
RNF40-212ENST00000602784 FUT10Q6P4F1 479 aa15.02■□□□□ -0
RNF40-212ENST00000602784 CD300LGQ6UXG3 332 aa15.02■□□□□ -0
RNF40-212ENST00000602784 USP37Q86T82 979 aa15.02■□□□□ -0
RNF40-212ENST00000602784 WDR49Q8IV35 697 aa15.02■□□□□ -0
RNF40-212ENST00000602784 TMC2Q8TDI7 906 aa15.02■□□□□ -0
RNF40-212ENST00000602784 PARD3BQ8TEW8 1205 aa15.02■□□□□ -0
RNF40-212ENST00000602784 RABGGTAQ92696 567 aa15.02■□□□□ -0
RNF40-212ENST00000602784 FNBP1Q96RU3 617 aa15.02■□□□□ -0
RNF40-212ENST00000602784 CHST7Q9NS84 486 aa15.02■□□□□ -0
RNF40-212ENST00000602784 INTS13Q9NVM9 706 aa15.02■□□□□ -0
RNF40-212ENST00000602784 CACNG4Q9UBN1 327 aa15.02■□□□□ -0
RNF40-212ENST00000602784 SSX2IPQ9Y2D8 614 aa15.02■□□□□ -0
RNF40-212ENST00000602784 PRRC2BQ5JSZ5 2229 aaKnown RBP15.02□□□□□ -0.01
RNF40-212ENST00000602784 PIRO00625 290 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 AKAP3O75969 853 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 AP3M2P53677 418 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 NLRP12P59046 1061 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 PAK1Q13153 545 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 SMC1AQ14683 1233 aaKnown RBP15.01□□□□□ -0.01
RNF40-212ENST00000602784 USP41Q3LFD5 358 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 C9orf57Q5W0N0 161 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 CEP135Q66GS9 1140 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 KLHL10Q6JEL2 608 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 TTI2Q6NXR4 508 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 INTS8Q75QN2 995 aaKnown RBP15.01□□□□□ -0.01
RNF40-212ENST00000602784 TMC7Q7Z402 723 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 MRPL43Q8N983 215 aaKnown RBP15.01□□□□□ -0.01
RNF40-212ENST00000602784 C3orf58Q8NDZ4 430 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 NELFBQ8WX92 580 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 PPP2R3CQ969Q6 453 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 SYAP1Q96A49 352 aaPredicted RBP15.01□□□□□ -0.01
RNF40-212ENST00000602784 CEP63Q96MT8 703 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 CGRRF1Q99675 332 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 TCF25Q9BQ70 676 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 HERC2P3Q9BVR0 1158 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 GPR62Q9BZJ7 368 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 GZF1Q9H116 711 aaPredicted RBP15.01□□□□□ -0.01
RNF40-212ENST00000602784 ZBP1Q9H171 429 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 NSUN3Q9H649 340 aaKnown RBP15.01□□□□□ -0.01
RNF40-212ENST00000602784 RWDD2AQ9UIY3 292 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 ITGA11Q9UKX5 1188 aa15.01□□□□□ -0.01
RNF40-212ENST00000602784 MYO7AQ13402 2215 aa15□□□□□ -0.01
RNF40-212ENST00000602784 IKBKBO14920 756 aa15□□□□□ -0.01
RNF40-212ENST00000602784 SLC16A3O15427 465 aaKnown RBP15□□□□□ -0.01
RNF40-212ENST00000602784 CXCL14O95715 111 aa15□□□□□ -0.01
RNF40-212ENST00000602784 TNNC2P02585 160 aa15□□□□□ -0.01
RNF40-212ENST00000602784 TMEM191BP0C7N4 346 aa15□□□□□ -0.01
RNF40-212ENST00000602784 DLATP10515 647 aaKnown RBP15□□□□□ -0.01
RNF40-212ENST00000602784 AARSP49588 968 aaKnown RBP eCLIP15□□□□□ -0.01
RNF40-212ENST00000602784 GUCY2FP51841 1108 aa15□□□□□ -0.01
RNF40-212ENST00000602784 DSG1Q02413 1049 aa15□□□□□ -0.01
RNF40-212ENST00000602784 KIAA0319Q5VV43 1072 aa15□□□□□ -0.01
RNF40-212ENST00000602784 FAM186BQ8IYM0 893 aa15□□□□□ -0.01
RNF40-212ENST00000602784 C1orf127Q8N9H9 656 aa15□□□□□ -0.01
RNF40-212ENST00000602784 CXorf38Q8TB03 319 aa15□□□□□ -0.01
RNF40-212ENST00000602784 MICAL1Q8TDZ2 1067 aa15□□□□□ -0.01
RNF40-212ENST00000602784 CCDC127Q96BQ5 260 aa15□□□□□ -0.01
RNF40-212ENST00000602784 BORCS6Q96GS4 357 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms