RNA–Protein interactions for RNA: ENST00000601392.5

CELF4-222, Transcript of CUGBP Elav-like family member 4, human

TSL 1 (best)

Gene CELF4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-222	ENST00000601392	TRANK1	O15050	2925 aa		13.8	□□□□□ -0.2
CELF4-222	ENST00000601392	CDH23	Q9H251	3354 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392		A0A0U1RQF3	1178 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	RFXAP	O00287	272 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	ARHGEF15	O94989	841 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	NPTXR	O95502	500 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	TPM1	P09493	284 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	TRIM49	P0CI25	452 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	TRIM49C	P0CI26	452 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	TNNI1	P19237	187 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	PON1	P27169	355 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	MXI1	P50539	228 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	FAM189B	P81408	668 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	CBWD6	Q4V339	395 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	EPC2	Q52LR7	807 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	CBWD3	Q5JTY5	395 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	CBWD5	Q5RIA9	395 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	ZBTB41	Q5SVQ8	909 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	DPY19L2P1	Q6NXN4	242 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	PPFIBP1	Q86W92	1011 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	CDR2L	Q86X02	465 aa	Predicted RBP	13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	CEP120	Q8N960	986 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	FBXL13	Q8NEE6	735 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	LMO3	Q8TAP4	145 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	ZNF516	Q92618	1163 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	TOP1MT	Q969P6	601 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	FAM81B	Q96LP2	452 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	TGS1	Q96RS0	853 aa	Known RBP	13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	EIF2A	Q9BY44	585 aa	Known RBP	13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	TTYH3	Q9C0H2	523 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	UBN1	Q9NPG3	1134 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	RGS18	Q9NS28	235 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	FAM105A	Q9NUU6	356 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	CAPN11	Q9UMQ6	739 aa		13.79	□□□□□ -0.2
CELF4-222	ENST00000601392	LINC01553	A4QN01	128 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	EPOP	A6NHQ4	379 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	LACTBL1	A8MY62	500 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	DLAT	P10515	647 aa	Known RBP	13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	HARS	P12081	509 aa	Known RBP	13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	RFX1	P22670	979 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	GCLM	P48507	274 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	MYL7	Q01449	175 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	TWF2	Q6IBS0	349 aa	Known RBP	13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	CNGA4	Q8IV77	575 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	SMG8	Q8ND04	991 aa	Known RBP	13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	ZNF397	Q8NF99	534 aa	Predicted RBP	13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	NEK11	Q8NG66	645 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	GDPD5	Q8WTR4	605 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	NUCKS1	Q9H1E3	243 aa	Known RBP	13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	TMX1	Q9H3N1	280 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	MMRN2	Q9H8L6	949 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	C1orf112	Q9NSG2	853 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	RNF216	Q9NWF9	866 aa	Predicted RBP	13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	RAB20	Q9NX57	234 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	CNTN3	Q9P232	1028 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	MYO6	Q9UM54	1294 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	GIT1	Q9Y2X7	761 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	IPP	Q9Y573	584 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	PCDHB2	Q9Y5E7	798 aa		13.78	□□□□□ -0.2
CELF4-222	ENST00000601392	CHD7	Q9P2D1	2997 aa		13.77	□□□□□ -0.2
CELF4-222	ENST00000601392	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	EOMES	O95936	686 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	GYPC	P04921	128 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	CXCL8	P10145	99 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	KCNE1	P15382	129 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	TRIM21	P19474	475 aa	Known RBP	13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	IBSP	P21815	317 aa	Predicted RBP	13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	ERVK-21	P61565	698 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	HTRA4	P83105	476 aa	Predicted RBP	13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	ZBED6	P86452	979 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	SKIV2L	Q15477	1246 aa	Known RBP	13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	ZBTB6	Q15916	424 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	SEZ6	Q53EL9	994 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	KLHDC7A	Q5VTJ3	777 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	TRIM65	Q6PJ69	517 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	SLC24A5	Q71RS6	500 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	CCDC186	Q7Z3E2	898 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	SPRED2	Q7Z698	418 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	FMNL3	Q8IVF7	1028 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	TMEM192	Q8IY95	271 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	SPC24	Q8NBT2	197 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	CCDC150	Q8NCX0	1101 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	FBXO22	Q8NEZ5	403 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	RSPH1	Q8WYR4	309 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	PGBD4	Q96DM1	585 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	ANKRD36BP1	Q96IX9	119 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	POP1	Q99575	1024 aa	Known RBP	13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	ELAC1	Q9H777	363 aa	Known RBP	13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	SNTG2	Q9NY99	539 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	CEP72	Q9P209	647 aa		13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	LUC7L2	Q9Y383	392 aa	Known RBP	13.77	□□□□□ -0.21
CELF4-222	ENST00000601392	NLRC5	Q86WI3	1866 aa		13.76	□□□□□ -0.21
CELF4-222	ENST00000601392	DLL1	O00548	723 aa		13.76	□□□□□ -0.21
CELF4-222	ENST00000601392	MEFV	O15553	781 aa	Predicted RBP	13.76	□□□□□ -0.21
CELF4-222	ENST00000601392	XPOT	O43592	962 aa	Known RBP	13.76	□□□□□ -0.21
CELF4-222	ENST00000601392	NOL4	O94818	638 aa		13.76	□□□□□ -0.21
CELF4-222	ENST00000601392	TNNC2	P02585	160 aa		13.76	□□□□□ -0.21
CELF4-222	ENST00000601392	SLC9A1	P19634	815 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms