RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 DEPTORQ8TB45 409 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 NACC1Q96RE7 527 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 CORO1BQ9BR76 489 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 TRMT61BQ9BVS5 477 aaKnown RBP18.45■□□□□ 0.54
USE1-208ENST00000600970 TMEM60Q9H2L4 133 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 NCOR2Q9Y618 2525 aa18.45■□□□□ 0.54
USE1-208ENST00000600970 BTBD18B2RXH4 712 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 PRRG1O14668 218 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 ATF2P15336 505 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 CYP11B2P19099 503 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 CCR2P41597 374 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 NT5DC1Q5TFE4 455 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 PADI6Q6TGC4 694 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 MAP4K3Q8IVH8 894 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 CELF5Q8N6W0 485 aaKnown RBP18.44■□□□□ 0.54
USE1-208ENST00000600970 FAM3CQ92520 227 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 ASB16Q96NS5 453 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 IER2Q9BTL4 223 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 KIFC3Q9BVG8 833 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 LMAN1LQ9HAT1 526 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 ZNF334Q9HCZ1 680 aaPredicted RBP18.44■□□□□ 0.54
USE1-208ENST00000600970 RAB23Q9ULC3 237 aa18.44■□□□□ 0.54
USE1-208ENST00000600970 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.44■□□□□ 0.54
USE1-208ENST00000600970 PDCD11Q14690 1871 aaKnown RBP18.43■□□□□ 0.54
USE1-208ENST00000600970 SMIM28A0A1B0GU29 152 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 ZNF197O14709 1029 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 MICAL2O94851 1124 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 SEC24AO95486 1093 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 ADRB1P08588 477 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 SOX4Q06945 474 aaPredicted RBP18.43■□□□□ 0.54
USE1-208ENST00000600970 ATF7IP2Q5U623 682 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 LAIR1Q6GTX8 287 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 VITQ6UXI7 678 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 TCEAL8Q8IYN2 117 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 IRF7Q92985 503 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 POLR3CQ9BUI4 534 aaPredicted RBP18.43■□□□□ 0.54
USE1-208ENST00000600970 CYP4F11Q9HBI6 524 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 TRPV5Q9NQA5 729 aa18.43■□□□□ 0.54
USE1-208ENST00000600970 DAXXQ9UER7 740 aaPredicted RBP18.43■□□□□ 0.54
USE1-208ENST00000600970 KMT2BQ9UMN6 2715 aaPredicted RBP18.43■□□□□ 0.54
USE1-208ENST00000600970 ARHGEF35A5YM69 484 aa18.42■□□□□ 0.54
USE1-208ENST00000600970 GDI1P31150 447 aa18.42■□□□□ 0.54
USE1-208ENST00000600970 CCR3P51677 355 aa18.42■□□□□ 0.54
USE1-208ENST00000600970 ARPP19P56211 112 aa18.42■□□□□ 0.54
USE1-208ENST00000600970 PPP2R5DQ14738 602 aa18.42■□□□□ 0.54
USE1-208ENST00000600970 PPP2R5AQ15172 486 aa18.42■□□□□ 0.54
USE1-208ENST00000600970 PDZD4Q76G19 769 aaPredicted RBP18.42■□□□□ 0.54
USE1-208ENST00000600970 DIS3L2Q8IYB7 885 aaKnown RBP18.42■□□□□ 0.54
USE1-208ENST00000600970 ZSWIM3Q96MP5 696 aa18.42■□□□□ 0.54
USE1-208ENST00000600970 POLD4Q9HCU8 107 aa18.42■□□□□ 0.54
USE1-208ENST00000600970 INSL5Q9Y5Q6 135 aa18.42■□□□□ 0.54
USE1-208ENST00000600970 ZFHX4Q86UP3 3567 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 PSMC3P17980 439 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 RPA1P27694 616 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 EFNA5P52803 228 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 MRPL58Q14197 206 aaKnown RBP18.41■□□□□ 0.54
USE1-208ENST00000600970 XKR4Q5GH76 650 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 ALKAL1Q6UXT8 129 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 PRR23BQ6ZRT6 265 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 HS6ST3Q8IZP7 471 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 CEP120Q8N960 986 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 NETO1Q8TDF5 533 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 SMARCD2Q92925 531 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 PIAS3Q9Y6X2 628 aa18.41■□□□□ 0.54
USE1-208ENST00000600970 PODXLO00592 558 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 SLC30A4O14863 429 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 SYN3O14994 580 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 LRP3O75074 770 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 MOSPD3O75425 235 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 RETP07949 1114 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 CHRNB1P11230 501 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 MCM7P33993 719 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 GRM5P41594 1212 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 FOSBP53539 338 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 SATB1Q01826 763 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 GAS6Q14393 721 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 CYP4A22Q5TCH4 519 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 APBB1IPQ7Z5R6 666 aaPredicted RBP18.4■□□□□ 0.54
USE1-208ENST00000600970 NECAB1Q8N987 351 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 DEPDC1BQ8WUY9 529 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 IFT74Q96LB3 600 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 FBXL5Q9UKA1 691 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 TNFSF13BQ9Y275 285 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 NCANO14594 1321 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 CACNA1BQ00975 2339 aa18.4■□□□□ 0.54
USE1-208ENST00000600970 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.39■□□□□ 0.53
USE1-208ENST00000600970 H7C4K7 107 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 VIPR2P41587 438 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 CXCL12P48061 93 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 YARSP54577 528 aaKnown RBP18.39■□□□□ 0.53
USE1-208ENST00000600970 OSTNP61366 133 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 ST3GAL2Q16842 350 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 PPM1JQ5JR12 505 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 TPGS2Q68CL5 300 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 ELMOD1Q8N336 334 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 ZMAT2Q96NC0 199 aaKnown RBP18.39■□□□□ 0.53
USE1-208ENST00000600970 CCDC94Q9BW85 323 aaPredicted RBP18.39■□□□□ 0.53
USE1-208ENST00000600970 CDT1Q9H211 546 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 TOPORSQ9NS56 1045 aaPredicted RBP18.39■□□□□ 0.53
USE1-208ENST00000600970 SEMA4GQ9NTN9 838 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms