RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 HSP90AA2PQ14568 343 aaPredicted RBP24.77■■□□□ 1.56
IRF3-227ENST00000600911 DUOXA2Q1HG44 320 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 SPOPLQ6IQ16 392 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 GJB7Q6PEY0 223 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 RABGGTAQ92696 567 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 CASD1Q96PB1 797 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 PAAF1Q9BRP4 392 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 PCDHB7Q9Y5E2 793 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 INPPL1O15357 1258 aa24.76■■□□□ 1.55
IRF3-227ENST00000600911 NOL4O94818 638 aa24.76■■□□□ 1.55
IRF3-227ENST00000600911 ITGB3P05106 788 aa24.76■■□□□ 1.55
IRF3-227ENST00000600911 TPM2P07951 284 aa24.76■■□□□ 1.55
IRF3-227ENST00000600911 HACE1Q8IYU2 909 aa24.76■■□□□ 1.55
IRF3-227ENST00000600911 ANKRD36BP1Q96IX9 119 aa24.76■■□□□ 1.55
IRF3-227ENST00000600911 INTS2Q9H0H0 1204 aaKnown RBP24.76■■□□□ 1.55
IRF3-227ENST00000600911 PMM2O15305 246 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 LRMPQ12912 555 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 FKBP15Q5T1M5 1219 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 FAM117BQ6P1L5 589 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 RPS6KC1Q96S38 1066 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 LSM14BQ9BX40 385 aaKnown RBP24.75■■□□□ 1.55
IRF3-227ENST00000600911 APOBEC3GQ9HC16 384 aaKnown RBP24.75■■□□□ 1.55
IRF3-227ENST00000600911 DPP3Q9NY33 737 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 DERAQ9Y315 318 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 DDHD2O94830 711 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 FGBP02675 491 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 MYL6P60660 151 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 GOLGA8FQ08AF8 430 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 GOLGA8DPQ0D2H9 430 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 EXOC3L4Q17RC7 722 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 TRIM65Q6PJ69 517 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 GBP6Q6ZN66 633 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 TMC6Q7Z403 805 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 USP37Q86T82 979 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 ZNF280BQ86YH2 543 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 NPAS4Q8IUM7 802 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 ARHGEF19Q8IW93 802 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 EHBP1Q8NDI1 1231 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 FBXL13Q8NEE6 735 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 TOP1MTQ969P6 601 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 RAB20Q9NX57 234 aa24.75■■□□□ 1.55
IRF3-227ENST00000600911 A0A1W2PQC6 194 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 GTPBP10A4D1E9 387 aaKnown RBP24.74■■□□□ 1.55
IRF3-227ENST00000600911 STX10O60499 249 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 TNNC2P02585 160 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 POLR2BP30876 1174 aaKnown RBP24.74■■□□□ 1.55
IRF3-227ENST00000600911 PIK3CAP42336 1068 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 SPC24Q8NBT2 197 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 TATDN2Q93075 761 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 XYLT2Q9H1B5 865 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 GANQ9H2C0 597 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 FAM207AQ9NSI2 230 aaPredicted RBP24.74■■□□□ 1.55
IRF3-227ENST00000600911 TBC1D13Q9NVG8 400 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 LRFN2Q9ULH4 789 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 UBQLN1Q9UMX0 589 aaKnown RBP24.74■■□□□ 1.55
IRF3-227ENST00000600911 KIAA1671Q9BY89 1806 aa24.74■■□□□ 1.55
IRF3-227ENST00000600911 CEP290O15078 2479 aa24.73■■□□□ 1.55
IRF3-227ENST00000600911 F8W810 466 aa24.73■■□□□ 1.55
IRF3-227ENST00000600911 P4HA2O15460 535 aa24.73■■□□□ 1.55
IRF3-227ENST00000600911 N4BP1O75113 896 aaKnown RBP24.73■■□□□ 1.55
IRF3-227ENST00000600911 THP07101 528 aa24.73■■□□□ 1.55
IRF3-227ENST00000600911 MAGEA10P43363 369 aaPredicted RBP24.73■■□□□ 1.55
IRF3-227ENST00000600911 NCOA4Q13772 614 aa24.73■■□□□ 1.55
IRF3-227ENST00000600911 PHLDB3Q6NSJ2 640 aa24.73■■□□□ 1.55
IRF3-227ENST00000600911 NT5DC4Q86YG4 428 aa24.73■■□□□ 1.55
IRF3-227ENST00000600911 KAT5Q92993 513 aa24.73■■□□□ 1.55
IRF3-227ENST00000600911 TTYH3Q9C0H2 523 aa24.73■■□□□ 1.55
IRF3-227ENST00000600911 RC3H2Q9HBD1 1191 aaKnown RBP24.73■■□□□ 1.55
IRF3-227ENST00000600911 UBN1Q9NPG3 1134 aa24.73■■□□□ 1.55
IRF3-227ENST00000600911 CASTOR2A6NHX0 329 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 ZBBXA8MT70 800 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 KRT19P08727 400 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 PAN2Q504Q3 1202 aaKnown RBP24.72■■□□□ 1.55
IRF3-227ENST00000600911 NOMO2Q5JPE7 1267 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 C9orf50Q5SZB4 431 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 GLB1LQ6UWU2 654 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 C3orf58Q8NDZ4 430 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 AGAP1Q9UPQ3 857 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 ANO9A1A5B4 782 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 PHACTR2O75167 634 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 DGKIO75912 1065 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 BAIAP3O94812 1187 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 CDC25BP30305 580 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 AP3M2P53677 418 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 C9orf57Q5W0N0 161 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 BEST2Q8NFU1 509 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 CACTINQ8WUQ7 758 aaKnown RBP24.72■■□□□ 1.55
IRF3-227ENST00000600911 DNAJB4Q9UDY4 337 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 NUB1Q9Y5A7 615 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 FHOD1Q9Y613 1164 aa24.72■■□□□ 1.55
IRF3-227ENST00000600911 GBF1Q92538 1859 aa24.71■■□□□ 1.55
IRF3-227ENST00000600911 RANBP2P49792 3224 aaKnown RBP24.71■■□□□ 1.55
IRF3-227ENST00000600911 TBKBP1A7MCY6 615 aa24.71■■□□□ 1.55
IRF3-227ENST00000600911 GYPCP04921 128 aa24.71■■□□□ 1.55
IRF3-227ENST00000600911 CLCNKBP51801 687 aa24.71■■□□□ 1.55
IRF3-227ENST00000600911 GRIK3Q13003 919 aa24.71■■□□□ 1.55
IRF3-227ENST00000600911 TBX2Q13207 712 aaPredicted RBP24.71■■□□□ 1.55
IRF3-227ENST00000600911 PDLIM2Q96JY6 352 aa24.71■■□□□ 1.55
IRF3-227ENST00000600911 PCMTD1Q96MG8 357 aaPredicted RBP24.71■■□□□ 1.55
IRF3-227ENST00000600911 ITIH6Q6UXX5 1313 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms