RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TBXAS1P24557 533 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 USP8P40818 1118 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 GNG11P61952 73 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 MGAT3Q09327 533 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 CCDC122Q5T0U0 273 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 JADE1Q6IE81 842 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 SYT10Q6XYQ8 523 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 ZNF592Q92610 1267 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 APOBEC3GQ9HC16 384 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 MYO1AQ9UBC5 1043 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 DERAQ9Y315 318 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 C2CD2Q9Y426 696 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 NFICP08651 508 aa18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 THPOP40225 353 aa18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 YARSP54577 528 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 NOP14P78316 857 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 CUL2Q13617 745 aa18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 SMYD5Q6GMV2 418 aa18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 SLC43A3Q8NBI5 491 aa18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 TAF4BQ92750 862 aa18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 SYT11Q9BT88 431 aa18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 SNTG2Q9NY99 539 aa18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 NOD1Q9Y239 953 aa18.98■□□□□ 0.63
SHKBP1-224ENST00000600718 A0A1W2PQ45 241 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 A0A1W2PQY0 241 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 RCCD1A6NED2 376 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 PJA2O43164 708 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 RPS6KA5O75582 802 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 TNFAIP3P21580 790 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 MYL6P60660 151 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 TMEM132DQ14C87 1099 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 SPOPLQ6IQ16 392 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 MYRIPQ8NFW9 859 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 SLC30A5Q8TAD4 765 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 ELMO3Q96BJ8 720 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 LACRTQ9GZZ8 138 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 DNAI1Q9UI46 699 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 GUCA1BQ9UMX6 200 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 PHF24Q9UPV7 400 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 NUB1Q9Y5A7 615 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 KBTBD13C9JR72 458 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 ABL1P00519 1130 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 NAB2Q15742 525 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 UBXN11Q5T124 520 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 DHX38Q92620 1227 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 AGPAT1Q99943 283 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 SEZ6LQ9BYH1 1024 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 UNC93B1Q9H1C4 597 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 STARD7Q9NQZ5 370 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 CHST12Q9NRB3 414 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 TRMT13Q9NUP7 481 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 NAGPAQ9UK23 515 aa18.97■□□□□ 0.63
SHKBP1-224ENST00000600718 A0A0U1RQG5 324 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 DDX3XO00571 662 aaKnown RBP eCLIP18.96■□□□□ 0.635e-8■■■■■ 77.1
SHKBP1-224ENST00000600718 GPR182O15218 404 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 CYP26A1O43174 497 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 CAND2O75155 1236 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 CTSHP09668 335 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 FAM26DQ5JW98 314 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 ALKBH5Q6P6C2 394 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 C1orf127Q8N9H9 656 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 FAXDC2Q96IV6 333 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 SNX27Q96L92 541 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 TSPAN18Q96SJ8 248 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 NENFQ9UMX5 172 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 ST3GAL5Q9UNP4 418 aa18.96■□□□□ 0.63
SHKBP1-224ENST00000600718 SGPL1O95470 568 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 BPIFB4P59827 614 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 TRIM71Q2Q1W2 868 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 IRX2Q9BZI1 471 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 XYLT2Q9H1B5 865 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 TRIM10Q9UDY6 481 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 TFR2Q9UP52 801 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 KRT5P13647 590 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 CASQ1P31415 396 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 ATICP31939 592 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 ZNF699Q32M78 642 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 ZNF569Q5MCW4 686 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 SCARA3Q6AZY7 606 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 TWF2Q6IBS0 349 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 ALKAL1Q6UXT8 129 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 LNX1Q8TBB1 728 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 KIF12Q96FN5 646 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 NIF3L1Q9GZT8 377 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 NXF3Q9H4D5 531 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 PAK6Q9NQU5 681 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 SIX4Q9UIU6 781 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 ITGA11Q9UKX5 1188 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 CNTN6Q9UQ52 1028 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 ATP8B3O60423 1300 aa18.95■□□□□ 0.62
SHKBP1-224ENST00000600718 ARVCFO00192 962 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 CLSTN1O94985 981 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 KRT19P08727 400 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 ACO1P21399 889 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 NFX1Q12986 1120 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 GLYCTKQ8IVS8 523 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 OLIG1Q8TAK6 271 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 U2AF1L4Q8WU68 220 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 WDR24Q96S15 920 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 ARID3AQ99856 593 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms