RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 ACKR2O00590 384 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 MTA2O94776 668 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 SYF2O95926 243 aaKnown RBP15.5■□□□□ 0.07
VRK3-217ENST00000599538 TNFRSF8P28908 595 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 PTENP60484 403 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 MYL6P60660 151 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 LAMC2Q13753 1193 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 ATF7IP2Q5U623 682 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 DDX42Q86XP3 938 aaKnown RBP eCLIP15.5■□□□□ 0.07
VRK3-217ENST00000599538 EFCAB13Q8IY85 973 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 RUBCNQ92622 972 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 CALR3Q96L12 384 aaKnown RBP15.5■□□□□ 0.07
VRK3-217ENST00000599538 CELF4Q9BZC1 486 aaKnown RBP15.5■□□□□ 0.07
VRK3-217ENST00000599538 CARD9Q9H257 536 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 MORF4L1Q9UBU8 362 aa15.5■□□□□ 0.07
VRK3-217ENST00000599538 CNOT8Q9UFF9 292 aaKnown RBP15.5■□□□□ 0.07
VRK3-217ENST00000599538 DOCK3Q8IZD9 2030 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 LOC102724159A0A0B4J2E5 919 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 A0A0U1RQG5 324 aaPredicted RBP15.49■□□□□ 0.07
VRK3-217ENST00000599538 ADCY6O43306 1168 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 GH1P01241 217 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 HOXC6P09630 235 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 PEX5P50542 639 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 PWP2Q15269 919 aaKnown RBP15.49■□□□□ 0.07
VRK3-217ENST00000599538 ZNF568Q3ZCX4 644 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 TSHZ1Q6ZSZ6 1077 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 ANKRD23Q86SG2 305 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 IFT20Q8IY31 132 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 ZDHHC14Q8IZN3 488 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 GTF3C2Q8WUA4 911 aaPredicted RBP15.49■□□□□ 0.07
VRK3-217ENST00000599538 PPP1R13LQ8WUF5 828 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 CD101Q93033 1021 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 C16orf70Q9BSU1 422 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 VIPAS39Q9H9C1 493 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 FAN1Q9Y2M0 1017 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 IVNS1ABPQ9Y6Y0 642 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 A0A087WZ62 844 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 GPR25O00155 361 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 MEFVO15553 781 aaPredicted RBP15.49■□□□□ 0.07
VRK3-217ENST00000599538 CELF2O95319 508 aaKnown RBP15.49■□□□□ 0.07
VRK3-217ENST00000599538 ASS1P00966 412 aaKnown RBP15.49■□□□□ 0.07
VRK3-217ENST00000599538 VTNP04004 478 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 RRM1P23921 792 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 EPHB4P54760 987 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 SPRYD7Q5W111 196 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 MPZL3Q6UWV2 235 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 WDR49Q8IV35 697 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 MCOLN2Q8IZK6 566 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 RBBP8NLQ8NC74 664 aaPredicted RBP15.49■□□□□ 0.07
VRK3-217ENST00000599538 PPTC7Q8NI37 304 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 NPLOC4Q8TAT6 608 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 ZSWIM1Q9BR11 485 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 FDXACB1Q9BRP7 624 aaPredicted RBP15.49■□□□□ 0.07
VRK3-217ENST00000599538 C2orf40Q9H1Z8 148 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 CDT1Q9H211 546 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 VTA1Q9NP79 307 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 TTC7AQ9ULT0 858 aaPredicted RBP15.49■□□□□ 0.07
VRK3-217ENST00000599538 SLC45A1Q9Y2W3 748 aa15.49■□□□□ 0.07
VRK3-217ENST00000599538 RBM47A0AV96 593 aaKnown RBP15.48■□□□□ 0.07
VRK3-217ENST00000599538 CYP1A1P04798 512 aaPredicted RBP15.48■□□□□ 0.07
VRK3-217ENST00000599538 SMPD1P17405 629 aa15.48■□□□□ 0.07
VRK3-217ENST00000599538 GGCXP38435 758 aa15.48■□□□□ 0.07
VRK3-217ENST00000599538 FAM193AP78312 1265 aa15.48■□□□□ 0.07
VRK3-217ENST00000599538 TFAMQ00059 246 aaKnown RBP15.48■□□□□ 0.07
VRK3-217ENST00000599538 DPP9Q86TI2 863 aa15.48■□□□□ 0.07
VRK3-217ENST00000599538 LINC01465Q8N7H1 131 aa15.48■□□□□ 0.07
VRK3-217ENST00000599538 MAML3Q96JK9 1138 aa15.48■□□□□ 0.07
VRK3-217ENST00000599538 RRAGCQ9HB90 399 aa15.48■□□□□ 0.07
VRK3-217ENST00000599538 VPS18Q9P253 973 aa15.48■□□□□ 0.07
VRK3-217ENST00000599538 ANK1P16157 1881 aa15.48■□□□□ 0.07
VRK3-217ENST00000599538 TTI1O43156 1089 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 STRNO43815 780 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 CXCL8P10145 99 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 PYGMP11217 842 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 ECHS1P30084 290 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 GNA15P30679 374 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 GCLCP48506 637 aaPredicted RBP15.47■□□□□ 0.07
VRK3-217ENST00000599538 AARSP49588 968 aaKnown RBP eCLIP15.47■□□□□ 0.07
VRK3-217ENST00000599538 GUCY2FP51841 1108 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 POU5F1Q01860 360 aaKnown RBP15.47■□□□□ 0.07
VRK3-217ENST00000599538 TFDP1Q14186 410 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 LLGL1Q15334 1064 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 TMEM132AQ24JP5 1023 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 ZNF394Q53GI3 561 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 DAB2IPQ5VWQ8 1189 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 EXOC8Q8IYI6 725 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 FAM81BQ96LP2 452 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 JPH2Q9BR39 696 aaPredicted RBP15.47■□□□□ 0.07
VRK3-217ENST00000599538 NEUROG2Q9H2A3 272 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 CNTN6Q9UQ52 1028 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 MROH7Q68CQ1 1323 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 TCRBV7S2A1N4TA0A589 114 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 CCDC188H7C350 402 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 CD58P19256 250 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 DMTNQ08495 405 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 GRB14Q14449 540 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 AMHR2Q16671 573 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 EMBQ6PCB8 327 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 ABRAQ8N0Z2 381 aa15.47■□□□□ 0.07
VRK3-217ENST00000599538 UBR7Q8N806 425 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms