RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 WDR64B1ANS9 1081 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 ARVCFO00192 962 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 DHX15O43143 795 aaKnown RBP11.54□□□□□ -0.56
SMG9-207ENST00000598860 MBD3O95983 291 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 GH1P01241 217 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 CLTBP09497 229 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 H2AFB1P0C5Y9 115 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 H2AFB2P0C5Z0 115 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 MUTP22033 750 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 PTGS1P23219 599 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 CMA1P23946 247 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 TECP42680 631 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 CDK7P50613 346 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 SPIRE1Q08AE8 756 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 ITGB3BPQ13352 177 aaPredicted RBP11.54□□□□□ -0.56
SMG9-207ENST00000598860 BRDTQ58F21 947 aaPredicted RBP11.54□□□□□ -0.56
SMG9-207ENST00000598860 ZC3H12AQ5D1E8 599 aaKnown RBP11.54□□□□□ -0.56
SMG9-207ENST00000598860 KRT79Q5XKE5 535 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 B3GNT9Q6UX72 402 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 CXCL17Q6UXB2 119 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 RUFY4Q6ZNE9 571 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 CCDC73Q6ZRK6 1079 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 PRR23CQ6ZRP0 262 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 ANKRD33Q7Z3H0 272 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 C2CD4AQ8NCU7 369 aaPredicted RBP11.54□□□□□ -0.56
SMG9-207ENST00000598860 OR6J1Q8NGC5 347 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 MRPS27Q92552 414 aaKnown RBP11.54□□□□□ -0.56
SMG9-207ENST00000598860 TOX2Q96NM4 488 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 DEPDC7Q96QD5 511 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 CCSER1Q9C0I3 900 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 CSRNP2Q9H175 543 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 TNKS2Q9H2K2 1166 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 SLC9A2Q9UBY0 812 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 LRWD1Q9UFC0 647 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 VAV3Q9UKW4 847 aa11.54□□□□□ -0.56
SMG9-207ENST00000598860 PRAMEF27A3QJZ7 478 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 KPNA6O60684 536 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 DKC1O60832 514 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMG9-207ENST00000598860 ATP9AO75110 1047 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 GGPS1O95749 300 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 SLFN14P0C7P3 912 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 UBA7P41226 1012 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 CPT1AP50416 773 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 EPHA7Q15375 998 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 DDR2Q16832 855 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 CELF3Q5SZQ8 465 aaKnown RBP11.53□□□□□ -0.56
SMG9-207ENST00000598860 RESP18Q5W5W9 173 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 NCAPH2Q6IBW4 605 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 DYMQ7RTS9 669 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 MIER3Q7Z3K6 550 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 C12orf40Q86WS4 652 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 DHX37Q8IY37 1157 aaKnown RBP11.53□□□□□ -0.56
SMG9-207ENST00000598860 TMEM40Q8WWA1 233 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 SEZ6LQ9BYH1 1024 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 NT5C3AQ9H0P0 336 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 MLXIPQ9HAP2 919 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 PDLIM7Q9NR12 457 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 LMBRD1Q9NUN5 540 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 CCDC39Q9UFE4 941 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 MROH7Q68CQ1 1323 aa11.53□□□□□ -0.56
SMG9-207ENST00000598860 FAM237AA0A1B0GTK4 181 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 TRIM43BA6NCK2 446 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 NOP56O00567 594 aaKnown RBP11.52□□□□□ -0.57
SMG9-207ENST00000598860 KIAA0355O15063 1070 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 DYRK3O43781 588 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 ARIH2O95376 493 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 MYL3P08590 195 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 RAG1P15918 1043 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 PLCG1P19174 1290 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 FXR1P51114 621 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMG9-207ENST00000598860 ITGA7Q13683 1181 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 PPP2R5EQ16537 467 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 IL17AQ16552 155 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 SGO2Q562F6 1265 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 SDE2Q6IQ49 451 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 MIS18BP1Q6P0N0 1132 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 SHC4Q6S5L8 630 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 C19orf47Q8N9M1 422 aaKnown RBP11.52□□□□□ -0.57
SMG9-207ENST00000598860 COPS5Q92905 334 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 BADQ92934 168 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 TRIM43Q96BQ3 446 aaPredicted RBP11.52□□□□□ -0.57
SMG9-207ENST00000598860 CALML4Q96GE6 196 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 CCDC34Q96HJ3 373 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 CDK5RAP3Q96JB5 506 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 CLIC6Q96NY7 704 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 KCNF1Q9H3M0 494 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 SEMA6BQ9H3T3 888 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 UNC45AQ9H3U1 944 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 TUFT1Q9NNX1 390 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 DISC1Q9NRI5 854 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 USP25Q9UHP3 1055 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 RAXQ9Y2V3 346 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 MSRB2Q9Y3D2 182 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 PCDHA10Q9Y5I2 948 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 ACTL7BQ9Y614 415 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 SCN10AQ9Y5Y9 1956 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 EVPLQ92817 2033 aa11.52□□□□□ -0.57
SMG9-207ENST00000598860 DDX39AO00148 427 aaKnown RBP11.51□□□□□ -0.57
SMG9-207ENST00000598860 TMPRSS2O15393 492 aa11.51□□□□□ -0.57
SMG9-207ENST00000598860 RPA1P27694 616 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms