RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 CRELD2Q6UXH1 353 aaPredicted RBP15.06■□□□□ 0
UPF1-205ENST00000598209 PPFIBP1Q86W92 1011 aa15.06■□□□□ 0
UPF1-205ENST00000598209 CEP57Q86XR8 500 aa15.06■□□□□ 0
UPF1-205ENST00000598209 GPR65Q8IYL9 337 aa15.06■□□□□ 0
UPF1-205ENST00000598209 ZSWIM2Q8NEG5 633 aa15.06■□□□□ 0
UPF1-205ENST00000598209 ADAMTS19Q8TE59 1207 aa15.06■□□□□ 0
UPF1-205ENST00000598209 SLC22A17Q8WUG5 538 aa15.06■□□□□ 0
UPF1-205ENST00000598209 SCFD1Q8WVM8 642 aa15.06■□□□□ 0
UPF1-205ENST00000598209 RIN2Q8WYP3 895 aaPredicted RBP15.06■□□□□ 0
UPF1-205ENST00000598209 CASP10Q92851 521 aa15.06■□□□□ 0
UPF1-205ENST00000598209 SAAL1Q96ER3 474 aa15.06■□□□□ 0
UPF1-205ENST00000598209 TSPAN18Q96SJ8 248 aa15.06■□□□□ 0
UPF1-205ENST00000598209 CBWD1Q9BRT8 395 aa15.06■□□□□ 0
UPF1-205ENST00000598209 FAM213AQ9BRX8 229 aa15.06■□□□□ 0
UPF1-205ENST00000598209 TTPALQ9BTX7 342 aa15.06■□□□□ 0
UPF1-205ENST00000598209 RXFP1Q9HBX9 757 aa15.06■□□□□ 0
UPF1-205ENST00000598209 CHMP5Q9NZZ3 219 aa15.06■□□□□ 0
UPF1-205ENST00000598209 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.06■□□□□ 0
UPF1-205ENST00000598209 UBE4BO95155 1302 aa15.06■□□□□ 0
UPF1-205ENST00000598209 TEX28O15482 410 aa15.05■□□□□ -0
UPF1-205ENST00000598209 MBTPS2O43462 519 aa15.05■□□□□ -0
UPF1-205ENST00000598209 XPOTO43592 962 aaKnown RBP15.05■□□□□ -0
UPF1-205ENST00000598209 LDHAP00338 332 aaKnown RBP15.05■□□□□ -0
UPF1-205ENST00000598209 NFICP08651 508 aa15.05■□□□□ -0
UPF1-205ENST00000598209 IL9P15248 144 aa15.05■□□□□ -0
UPF1-205ENST00000598209 EPCAMP16422 314 aa15.05■□□□□ -0
UPF1-205ENST00000598209 CYP3A5P20815 502 aa15.05■□□□□ -0
UPF1-205ENST00000598209 BRCC3P46736 316 aa15.05■□□□□ -0
UPF1-205ENST00000598209 POU5F1Q01860 360 aaKnown RBP15.05■□□□□ -0
UPF1-205ENST00000598209 SMAD4Q13485 552 aaKnown RBP15.05■□□□□ -0
UPF1-205ENST00000598209 RTP2Q5QGT7 225 aa15.05■□□□□ -0
UPF1-205ENST00000598209 JADE1Q6IE81 842 aa15.05■□□□□ -0
UPF1-205ENST00000598209 PRSS55Q6UWB4 352 aaPredicted RBP15.05■□□□□ -0
UPF1-205ENST00000598209 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.05■□□□□ -0
UPF1-205ENST00000598209 NELFCDQ8IXH7 590 aa15.05■□□□□ -0
UPF1-205ENST00000598209 TMEM130Q8N3G9 435 aa15.05■□□□□ -0
UPF1-205ENST00000598209 SMRP1Q8NCR6 262 aa15.05■□□□□ -0
UPF1-205ENST00000598209 PCIF1Q9H4Z3 704 aa15.05■□□□□ -0
UPF1-205ENST00000598209 ASB7Q9H672 318 aa15.05■□□□□ -0
UPF1-205ENST00000598209 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.05■□□□□ -0
UPF1-205ENST00000598209 FAM50BQ9Y247 325 aa15.05■□□□□ -0
UPF1-205ENST00000598209 SCN1AP35498 2009 aa15.05■□□□□ -0
UPF1-205ENST00000598209 GOLGA8IPA6NC78 632 aa15.04■□□□□ -0
UPF1-205ENST00000598209 GOLGA8JA6NMD2 632 aa15.04■□□□□ -0
UPF1-205ENST00000598209 I3L4J1 428 aa15.04■□□□□ -0
UPF1-205ENST00000598209 KIAA0391O15091 583 aaKnown RBP15.04■□□□□ -0
UPF1-205ENST00000598209 TRAPPC3O43617 180 aa15.04■□□□□ -0
UPF1-205ENST00000598209 EXTL3O43909 919 aa15.04■□□□□ -0
UPF1-205ENST00000598209 RPN1P04843 607 aaKnown RBP15.04■□□□□ -0
UPF1-205ENST00000598209 ADH1AP07327 375 aa15.04■□□□□ -0
UPF1-205ENST00000598209 FGFR3P22607 806 aa15.04■□□□□ -0
UPF1-205ENST00000598209 LRPAP1P30533 357 aa15.04■□□□□ -0
UPF1-205ENST00000598209 CLCN4P51793 760 aa15.04■□□□□ -0
UPF1-205ENST00000598209 GUCY2FP51841 1108 aa15.04■□□□□ -0
UPF1-205ENST00000598209 DPYDQ12882 1025 aa15.04■□□□□ -0
UPF1-205ENST00000598209 PSMD2Q13200 908 aa15.04■□□□□ -0
UPF1-205ENST00000598209 TMEM132DQ14C87 1099 aa15.04■□□□□ -0
UPF1-205ENST00000598209 BMT2Q1RMZ1 405 aa15.04■□□□□ -0
UPF1-205ENST00000598209 SYCE2Q6PIF2 218 aa15.04■□□□□ -0
UPF1-205ENST00000598209 FMR1NBQ8N0W7 255 aaPredicted RBP15.04■□□□□ -0
UPF1-205ENST00000598209 BEST2Q8NFU1 509 aa15.04■□□□□ -0
UPF1-205ENST00000598209 NOC3LQ8WTT2 800 aaKnown RBP15.04■□□□□ -0
UPF1-205ENST00000598209 PIK3R5Q8WYR1 880 aa15.04■□□□□ -0
UPF1-205ENST00000598209 NECAB3Q96P71 396 aaPredicted RBP15.04■□□□□ -0
UPF1-205ENST00000598209 FNIP2Q9P278 1114 aa15.04■□□□□ -0
UPF1-205ENST00000598209 DERAQ9Y315 318 aa15.04■□□□□ -0
UPF1-205ENST00000598209 NUB1Q9Y5A7 615 aa15.04■□□□□ -0
UPF1-205ENST00000598209 DLL1O00548 723 aa15.03■□□□□ -0
UPF1-205ENST00000598209 TGFB1I1O43294 461 aa15.03■□□□□ -0
UPF1-205ENST00000598209 IL18RAPO95256 599 aa15.03■□□□□ -0
UPF1-205ENST00000598209 HOXB8P17481 243 aaPredicted RBP15.03■□□□□ -0
UPF1-205ENST00000598209 RPL17P18621 184 aaKnown RBP15.03■□□□□ -0
UPF1-205ENST00000598209 TKTP29401 623 aaKnown RBP15.03■□□□□ -0
UPF1-205ENST00000598209 CREMQ03060 361 aa15.03■□□□□ -0
UPF1-205ENST00000598209 STK4Q13043 487 aa15.03■□□□□ -0
UPF1-205ENST00000598209 PSMD5Q16401 504 aa15.03■□□□□ -0
UPF1-205ENST00000598209 SPATA1Q5VX52 437 aa15.03■□□□□ -0
UPF1-205ENST00000598209 KANK3Q6NY19 840 aa15.03■□□□□ -0
UPF1-205ENST00000598209 PDXDC1Q6P996 788 aa15.03■□□□□ -0
UPF1-205ENST00000598209 GLYCTKQ8IVS8 523 aa15.03■□□□□ -0
UPF1-205ENST00000598209 BRSK2Q8IWQ3 736 aa15.03■□□□□ -0
UPF1-205ENST00000598209 GPD1LQ8N335 351 aa15.03■□□□□ -0
UPF1-205ENST00000598209 KIAA0895Q8NCT3 520 aa15.03■□□□□ -0
UPF1-205ENST00000598209 LNX1Q8TBB1 728 aaPredicted RBP15.03■□□□□ -0
UPF1-205ENST00000598209 CCDC47Q96A33 483 aaKnown RBP15.03■□□□□ -0
UPF1-205ENST00000598209 CCDC34Q96HJ3 373 aa15.03■□□□□ -0
UPF1-205ENST00000598209 UHRF1Q96T88 793 aaPredicted RBP15.03■□□□□ -0
UPF1-205ENST00000598209 APOL5Q9BWW9 433 aa15.03■□□□□ -0
UPF1-205ENST00000598209 DZANK1Q9NVP4 752 aa15.03■□□□□ -0
UPF1-205ENST00000598209 RBAKQ9NYW8 714 aaPredicted RBP15.03■□□□□ -0
UPF1-205ENST00000598209 C2CD2Q9Y426 696 aa15.03■□□□□ -0
UPF1-205ENST00000598209 C2orf16Q68DN1 1984 aa15.03■□□□□ -0
UPF1-205ENST00000598209 TULP1O00294 542 aaPredicted RBP15.02■□□□□ -0
UPF1-205ENST00000598209 CLIC2O15247 247 aa15.02■□□□□ -0
UPF1-205ENST00000598209 MCM4P33991 863 aa15.02■□□□□ -0
UPF1-205ENST00000598209 WNT7BP56706 349 aa15.02■□□□□ -0
UPF1-205ENST00000598209 FAM160A1Q05DH4 1040 aa15.02■□□□□ -0
UPF1-205ENST00000598209 SNW1Q13573 536 aaKnown RBP15.02■□□□□ -0
UPF1-205ENST00000598209 SMAD2Q15796 467 aaKnown RBP15.02■□□□□ -0
UPF1-205ENST00000598209 KNOP1Q1ED39 458 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms