RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 VN1R3Q9BXE9 311 aa22.03■■□□□ 1.12
PNKP-211ENST00000598020 PDE11AQ9HCR9 933 aa22.03■■□□□ 1.12
PNKP-211ENST00000598020 F8W810 466 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 PODXLO00592 558 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 TADA2AO75478 443 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 KIF4AO95239 1232 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 IGFBP4P22692 258 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 MCCD1P59942 119 aaPredicted RBP22.02■■□□□ 1.12
PNKP-211ENST00000598020 ADAM9Q13443 819 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 ANKRD40Q6AI12 368 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 ZC3H3Q8IXZ2 948 aaKnown RBP22.02■■□□□ 1.12
PNKP-211ENST00000598020 RDH13Q8NBN7 331 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 CACTINQ8WUQ7 758 aaKnown RBP22.02■■□□□ 1.12
PNKP-211ENST00000598020 RABGGTAQ92696 567 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 NGRNQ9NPE2 291 aaKnown RBP22.02■■□□□ 1.12
PNKP-211ENST00000598020 STXBP5LQ9Y2K9 1186 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 FRMD4BQ9Y2L6 1034 aa22.02■■□□□ 1.12
PNKP-211ENST00000598020 ATG2AQ2TAZ0 1938 aa22.02■■□□□ 1.11
PNKP-211ENST00000598020 B3GAT3O94766 335 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 SOD2P04179 222 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 CASP4P49662 377 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 PMS1P54277 932 aaKnown RBP22.01■■□□□ 1.11
PNKP-211ENST00000598020 ERVFC1P60507 584 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 ENPEPQ07075 957 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 ELAVL2Q12926 359 aaKnown RBP22.01■■□□□ 1.11
PNKP-211ENST00000598020 TIGD5Q53EQ6 642 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 FUT10Q6P4F1 479 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 WDR49Q8IV35 697 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 GPR65Q8IYL9 337 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 VPS52Q8N1B4 723 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 MLKLQ8NB16 471 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 C3orf58Q8NDZ4 430 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 MKNK1Q9BUB5 465 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 HERC2P3Q9BVR0 1158 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 ZBP1Q9H171 429 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 INTS13Q9NVM9 706 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 IRAK3Q9Y616 596 aa22.01■■□□□ 1.11
PNKP-211ENST00000598020 ANO9A1A5B4 782 aa22■■□□□ 1.11
PNKP-211ENST00000598020 PIRO00625 290 aa22■■□□□ 1.11
PNKP-211ENST00000598020 CTSAP10619 480 aa22■■□□□ 1.11
PNKP-211ENST00000598020 PAX3P23760 479 aa22■■□□□ 1.11
PNKP-211ENST00000598020 CLDN10P78369 228 aa22■■□□□ 1.11
PNKP-211ENST00000598020 FKBP3Q00688 224 aaKnown RBP22■■□□□ 1.11
PNKP-211ENST00000598020 BMS1Q14692 1282 aaKnown RBP22■■□□□ 1.11
PNKP-211ENST00000598020 CCDC183Q5T5S1 534 aa22■■□□□ 1.11
PNKP-211ENST00000598020 GPR62Q9BZJ7 368 aa22■■□□□ 1.11
PNKP-211ENST00000598020 GZF1Q9H116 711 aaPredicted RBP22■■□□□ 1.11
PNKP-211ENST00000598020 CHST7Q9NS84 486 aa22■■□□□ 1.11
PNKP-211ENST00000598020 DPP3Q9NY33 737 aa22■■□□□ 1.11
PNKP-211ENST00000598020 SF3B1O75533 1304 aaKnown RBP eCLIP22■■□□□ 1.11
PNKP-211ENST00000598020 BICDL2A1A5D9 508 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 CETN3O15182 167 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 TRAPPC3O43617 180 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 AKAP3O75969 853 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 IRS1P35568 1242 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 PSMC2P35998 433 aaKnown RBP21.99■■□□□ 1.11
PNKP-211ENST00000598020 NLRP12P59046 1061 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 TFAMQ00059 246 aaKnown RBP21.99■■□□□ 1.11
PNKP-211ENST00000598020 C9orf57Q5W0N0 161 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 CEP135Q66GS9 1140 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 TTI2Q6NXR4 508 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 TMC2Q8TDI7 906 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 PARD3BQ8TEW8 1205 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 NELFBQ8WX92 580 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 FNBP1Q96RU3 617 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 CGRRF1Q99675 332 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 TCF25Q9BQ70 676 aa21.99■■□□□ 1.11
PNKP-211ENST00000598020 NSUN3Q9H649 340 aaKnown RBP21.99■■□□□ 1.11
PNKP-211ENST00000598020 TRIM49BA6NDI0 452 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 IGFBP6P24592 240 aaPredicted RBP21.98■■□□□ 1.11
PNKP-211ENST00000598020 AARSP49588 968 aaKnown RBP eCLIP21.98■■□□□ 1.11
PNKP-211ENST00000598020 GUCY2FP51841 1108 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 PAK1Q13153 545 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 SMC1AQ14683 1233 aaKnown RBP21.98■■□□□ 1.11
PNKP-211ENST00000598020 DUOXA2Q1HG44 320 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 KLHL40Q2TBA0 621 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 USP41Q3LFD5 358 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 TMC7Q7Z402 723 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 MRPL43Q8N983 215 aaKnown RBP21.98■■□□□ 1.11
PNKP-211ENST00000598020 CXorf38Q8TB03 319 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 PLEKHO2Q8TD55 490 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 ENTPD7Q9NQZ7 604 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 SSX2IPQ9Y2D8 614 aa21.98■■□□□ 1.11
PNKP-211ENST00000598020 SLC16A3O15427 465 aaKnown RBP21.97■■□□□ 1.11
PNKP-211ENST00000598020 LILRB3O75022 631 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 AP3M2P53677 418 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 DSG1Q02413 1049 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 CT47A1Q5JQC4 288 aaPredicted RBP21.97■■□□□ 1.11
PNKP-211ENST00000598020 KIAA0319Q5VV43 1072 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 KLHL10Q6JEL2 608 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 INTS8Q75QN2 995 aaKnown RBP21.97■■□□□ 1.11
PNKP-211ENST00000598020 TAS1R1Q7RTX1 841 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 USP37Q86T82 979 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 TMEM130Q8N3G9 435 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 C1orf127Q8N9H9 656 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 OR5B17Q8NGF7 314 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 MICAL1Q8TDZ2 1067 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 HASPINQ8TF76 798 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 CCDC127Q96BQ5 260 aa21.97■■□□□ 1.11
PNKP-211ENST00000598020 BORCS6Q96GS4 357 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms