RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 KIAA1841Q6NSI8 718 aa16.81■□□□□ 0.28
XRCC1-206ENST00000597811 TMC5Q6UXY8 1006 aa16.81■□□□□ 0.28
XRCC1-206ENST00000597811 NECTIN4Q96NY8 510 aa16.81■□□□□ 0.28
XRCC1-206ENST00000597811 TMEM206Q9H813 350 aa16.81■□□□□ 0.28
XRCC1-206ENST00000597811 RPF1Q9H9Y2 349 aaKnown RBP16.81■□□□□ 0.28
XRCC1-206ENST00000597811 TSHZ2Q9NRE2 1034 aa16.81■□□□□ 0.28
XRCC1-206ENST00000597811 SSX2IPQ9Y2D8 614 aa16.81■□□□□ 0.28
XRCC1-206ENST00000597811 TISP43B9A030 160 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 ABLIM1O14639 778 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 KIF4AO95239 1232 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 MTHFRP42898 656 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 PPP2R3AQ06190 1150 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 POSTNQ15063 836 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 KRBA2Q6ZNG9 492 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 HASPINQ8TF76 798 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 EDAQ92838 391 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 KCNN1Q92952 543 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 SNX27Q96L92 541 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 RIPOR3Q96MK2 946 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 FGFBP2Q9BYJ0 223 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 HAPLN2Q9GZV7 340 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 IKZF4Q9H2S9 585 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 SFXN1Q9H9B4 322 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 RXFP1Q9HBX9 757 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 SLC39A2Q9NP94 309 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 SLC38A7Q9NVC3 462 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 AGO2Q9UKV8 859 aaKnown RBP16.8■□□□□ 0.28
XRCC1-206ENST00000597811 HCN4Q9Y3Q4 1203 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 DOCK8Q8NF50 2099 aa16.8■□□□□ 0.28
XRCC1-206ENST00000597811 SMIM28A0A1B0GU29 152 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 PVALEFA0A1B0GWK0 134 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 C2CD4DB7Z1M9 353 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 ADH1AP07327 375 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 CXCL8P10145 99 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 TNFSF9P41273 254 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 ACOT2P49753 483 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 SPAG1Q07617 926 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 USP41Q3LFD5 358 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 ATAT1Q5SQI0 421 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 CNNM4Q6P4Q7 775 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 SLC39A4Q6P5W5 647 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 NELFCDQ8IXH7 590 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 MAN1C1Q9NR34 630 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 NR2E1Q9Y466 385 aa16.79■□□□□ 0.28
XRCC1-206ENST00000597811 SF3B1O75533 1304 aaKnown RBP eCLIP16.78■□□□□ 0.28
XRCC1-206ENST00000597811 A0A0B4J269 797 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 FAM237AA0A1B0GTK4 181 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 PPP1R37O75864 691 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 ZXDAP98168 799 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 SLC10A6Q3KNW5 377 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 RTP2Q5QGT7 225 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 ARMCX5Q6P1M9 558 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 HFE2Q6ZVN8 426 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 GPR149Q86SP6 731 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 GLIS3Q8NEA6 775 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 RIN2Q8WYP3 895 aaPredicted RBP16.78■□□□□ 0.28
XRCC1-206ENST00000597811 KIF12Q96FN5 646 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 PPP1R10Q96QC0 940 aaKnown RBP16.78■□□□□ 0.28
XRCC1-206ENST00000597811 STRA6Q9BX79 667 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 PCIF1Q9H4Z3 704 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 GOLGA2P5Q9HBQ8 144 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 KMT2EQ8IZD2 1858 aa16.78■□□□□ 0.28
XRCC1-206ENST00000597811 EIF3DO15371 548 aaKnown RBP eCLIP16.77■□□□□ 0.28
XRCC1-206ENST00000597811 B3GAT3O94766 335 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 GLUD1P00367 558 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 RPN1P04843 607 aaKnown RBP16.77■□□□□ 0.28
XRCC1-206ENST00000597811 MYL1P05976 194 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 RPL17P18621 184 aaKnown RBP16.77■□□□□ 0.28
XRCC1-206ENST00000597811 IGFBP6P24592 240 aaPredicted RBP16.77■□□□□ 0.28
XRCC1-206ENST00000597811 PTPN21Q16825 1174 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 KMT5BQ4FZB7 885 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 ZBTB41Q5SVQ8 909 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 PRSS55Q6UWB4 352 aaPredicted RBP16.77■□□□□ 0.28
XRCC1-206ENST00000597811 TRIM67Q6ZTA4 783 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 CEP57Q86XR8 500 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 UROC1Q96N76 676 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 FAM213AQ9BRX8 229 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 PLEKHA5Q9HAU0 1116 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 CNTN3Q9P232 1028 aa16.77■□□□□ 0.28
XRCC1-206ENST00000597811 LACTBL1A8MY62 500 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 XPOTO43592 962 aaKnown RBP16.76■□□□□ 0.27
XRCC1-206ENST00000597811 LDHAP00338 332 aaKnown RBP16.76■□□□□ 0.27
XRCC1-206ENST00000597811 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 SPATA31D3P0C874 917 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 CLCNKBP51801 687 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 FAM160A1Q05DH4 1040 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 ALKAL1Q6UXT8 129 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 SPATA31D4Q6ZUB0 917 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 PALB2Q86YC2 1186 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 GPR65Q8IYL9 337 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 C18orf25Q96B23 403 aaPredicted RBP16.76■□□□□ 0.27
XRCC1-206ENST00000597811 SAAL1Q96ER3 474 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 ZMAT2Q96NC0 199 aaKnown RBP16.76■□□□□ 0.27
XRCC1-206ENST00000597811 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.76■□□□□ 0.27
XRCC1-206ENST00000597811 FNIP2Q9P278 1114 aa16.76■□□□□ 0.27
XRCC1-206ENST00000597811 HOOK1Q9UJC3 728 aaKnown RBP16.76■□□□□ 0.27
XRCC1-206ENST00000597811 TCHHQ07283 1943 aa16.75■□□□□ 0.27
XRCC1-206ENST00000597811 GOLGA8IPA6NC78 632 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms