RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 MFSD14BQ5SR56 506 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 IRGCQ6NXR0 463 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 NSMFQ6X4W1 530 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 KAT5Q92993 513 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 DLGAP2Q9P1A6 1054 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 STOML1Q9UBI4 398 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 SERPINB13Q9UIV8 391 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 NVLO15381 856 aaKnown RBP16.51■□□□□ 0.23
IRF3-219ENST00000597636 PRPF4O43172 522 aaKnown RBP eCLIP16.51■□□□□ 0.239e-7■■□□□ 13.2
IRF3-219ENST00000597636 BRD2P25440 801 aaKnown RBP16.51■□□□□ 0.23
IRF3-219ENST00000597636 CIITAP33076 1130 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 SLC18A1P54219 525 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 PPP3CAQ08209 521 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 PDK4Q16654 411 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 DOK7Q18PE1 504 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 TPH2Q8IWU9 490 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 FAM71AQ8IYT1 594 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 CYP2W1Q8TAV3 490 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 VCXQ9H320 206 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 ACP6Q9NPH0 428 aa16.51■□□□□ 0.23
IRF3-219ENST00000597636 MROH7Q68CQ1 1323 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 ZBTB39O15060 712 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 SLITRK3O94933 977 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 RTN3O95197 1032 aaPredicted RBP16.5■□□□□ 0.23
IRF3-219ENST00000597636 MYBL1P10243 752 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 RPS6KA3P51812 740 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 FMO1Q01740 532 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 TRAF1Q13077 416 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 NBPF20Q3BBV1 942 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 EPC2Q52LR7 807 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 ODR4Q5SWX8 454 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 SYCP3Q8IZU3 236 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 CFAP61Q8NHU2 1237 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 LRRC8CQ8TDW0 803 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 NMRK1Q9NWW6 199 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 GSTTP1A0A1W2PQM5 241 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 SIGLEC16A6NMB1 481 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 P4HA2O15460 535 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 ZBTB7AO95365 584 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 ABHD2P08910 425 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 RRM1P23921 792 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 VHLP40337 213 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 RFC5P40937 340 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 TAF1BQ53T94 588 aaPredicted RBP16.5■□□□□ 0.23
IRF3-219ENST00000597636 SLC45A4Q5BKX6 768 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 C4orf50Q6ZRC1 276 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 SLC47A2Q86VL8 602 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 HERPUD2Q9BSE4 406 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 TUFT1Q9NNX1 390 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 WDR35Q9P2L0 1181 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 LNPEPQ9UIQ6 1025 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 GRID1Q9ULK0 1009 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 NEU2Q9Y3R4 380 aa16.5■□□□□ 0.23
IRF3-219ENST00000597636 CYP26A1O43174 497 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 FOSP01100 380 aaPredicted RBP16.49■□□□□ 0.23
IRF3-219ENST00000597636 IL1R1P14778 569 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 SHMT1P34896 483 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 GCLMP48507 274 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 MYBPC2Q14324 1141 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 RASA3Q14644 834 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 GRIPAP1Q4V328 841 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 KHDC1Q4VXA5 237 aaKnown RBP16.49■□□□□ 0.23
IRF3-219ENST00000597636 OR52E8Q6IFG1 317 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 BBOF1Q8ND07 529 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 SAR1AQ9NR31 198 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 GGA1Q9UJY5 639 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 LRCH1Q9Y2L9 728 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 DAGLAQ9Y4D2 1042 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 MAGEA4P43358 317 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 BAG6P46379 1132 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 VAMP7P51809 220 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 CYP4F22Q6NT55 531 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 MTHFD1LQ6UB35 978 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 UCMAQ8WVF2 138 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 DYDC2Q96IM9 177 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 TRABDQ9H4I3 376 aa16.49■□□□□ 0.23
IRF3-219ENST00000597636 R3HDM2Q9Y2K5 976 aaKnown RBP16.49■□□□□ 0.23
IRF3-219ENST00000597636 EXOC1LA0A1B0GW35 172 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 PPEF1O14829 653 aaPredicted RBP16.48■□□□□ 0.23
IRF3-219ENST00000597636 RAD21O60216 631 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 HNRNPCL1O60812 293 aaKnown RBP16.48■□□□□ 0.23
IRF3-219ENST00000597636 GCAP28676 217 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 PPP1R15BQ5SWA1 713 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 SYDE2Q5VT97 1194 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 RNF220Q5VTB9 566 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 IZUMO3Q5VZ72 239 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 SLC5A5Q92911 643 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 IFT43Q96FT9 208 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 CYLDQ9NQC7 956 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.48■□□□□ 0.23
IRF3-219ENST00000597636 ZFP69BQ9UJL9 534 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 SMG5Q9UPR3 1016 aaKnown RBP16.48■□□□□ 0.23
IRF3-219ENST00000597636 ZNF365Q70YC5 407 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 CCDC89Q8N998 374 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 CFAP57Q96MR6 1250 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 RBM15Q96T37 977 aaKnown RBP eCLIP16.48■□□□□ 0.23
IRF3-219ENST00000597636 MIPEPQ99797 713 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 KIAA1586Q9HCI6 787 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms