RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 YWHABP31946 246 aaKnown RBP17.13■□□□□ 0.33
LIG1-214ENST00000597146 MPLP40238 635 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 RAP1GAPP47736 663 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 RCAN1P53805 252 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 DEPDC1BQ8WUY9 529 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 GAB3Q8WWW8 586 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 ZCCHC14Q8WYQ9 949 aaKnown RBP17.13■□□□□ 0.33
LIG1-214ENST00000597146 GATA6Q92908 595 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 BRF1Q92994 677 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 DDX27Q96GQ7 796 aaKnown RBP17.13■□□□□ 0.33
LIG1-214ENST00000597146 CYP46A1Q9Y6A2 500 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 NUP210Q8TEM1 1887 aaPredicted RBP17.13■□□□□ 0.33
LIG1-214ENST00000597146 LAMA5O15230 3695 aa17.13■□□□□ 0.33
LIG1-214ENST00000597146 I3L4J1 428 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 MOSPD3O75425 235 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 RPP40O75818 363 aaKnown RBP17.12■□□□□ 0.33
LIG1-214ENST00000597146 P4HBP07237 508 aaKnown RBP17.12■□□□□ 0.33
LIG1-214ENST00000597146 RPS6KB1P23443 525 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 ROR1Q01973 937 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 TFDP1Q14186 410 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 MXD4Q14582 209 aaPredicted RBP17.12■□□□□ 0.33
LIG1-214ENST00000597146 PDZD4Q76G19 769 aaPredicted RBP17.12■□□□□ 0.33
LIG1-214ENST00000597146 RTL10Q7L3V2 364 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 CACNA2D4Q7Z3S7 1137 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 HS6ST3Q8IZP7 471 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 TTC8Q8TAM2 541 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 KCNB2Q92953 911 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 RSPRY1Q96DX4 576 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 LOXL4Q96JB6 756 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 EDEM2Q9BV94 578 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 SLKQ9H2G2 1235 aaPredicted RBP17.12■□□□□ 0.33
LIG1-214ENST00000597146 SNTG2Q9NY99 539 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 RGL1Q9NZL6 768 aa17.12■□□□□ 0.33
LIG1-214ENST00000597146 FREM2Q5SZK8 3169 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 A0A1B0GUA9 196 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 TMEM8BA6NDV4 472 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 PRRG1O14668 218 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 EPB41L2O43491 1005 aaKnown RBP17.11■□□□□ 0.33
LIG1-214ENST00000597146 EXTL3O43909 919 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 DKC1O60832 514 aaKnown RBP eCLIP17.11■□□□□ 0.33
LIG1-214ENST00000597146 RECQL4O94761 1208 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 PRKCBP05771 671 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 THP07101 528 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 SPIRE1Q08AE8 756 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 PPP2R5CQ13362 524 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 PKN3Q6P5Z2 889 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 ZSCAN18Q8TBC5 510 aaPredicted RBP17.11■□□□□ 0.33
LIG1-214ENST00000597146 CSGALNACT1Q8TDX6 532 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 DDX25Q9UHL0 483 aaKnown RBP17.11■□□□□ 0.33
LIG1-214ENST00000597146 INSL5Q9Y5Q6 135 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 BACE2Q9Y5Z0 518 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 ADAMTS20P59510 1910 aa17.11■□□□□ 0.33
LIG1-214ENST00000597146 HEPACAM2A8MVW5 462 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 SPECC1L-ADORA2AF8WAN1 911 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 ZNF197O14709 1029 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 SEC24AO95486 1093 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 CCDC192P0DO97 292 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 GLRA2P23416 452 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 HOXA6P31267 233 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 KPNA1P52294 538 aaPredicted RBP17.1■□□□□ 0.33
LIG1-214ENST00000597146 NLRP5P59047 1200 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 CYP4A11Q02928 519 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 CTTNQ14247 550 aaKnown RBP17.1■□□□□ 0.33
LIG1-214ENST00000597146 PON2Q15165 354 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 CD300LGQ6UXG3 332 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 MFSD6LQ8IWD5 586 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 C4orf19Q8IY42 314 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 SCNM1Q9BWG6 230 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 SLC26A6Q9BXS9 759 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 CYP4F11Q9HBI6 524 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 NID2Q14112 1375 aa17.1■□□□□ 0.33
LIG1-214ENST00000597146 ASH1LQ9NR48 2969 aaKnown RBP17.09■□□□□ 0.33
LIG1-214ENST00000597146 TTLL13PA6NNM8 815 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 C4orf47A7E2U8 309 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 TBX3O15119 743 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 B3GAT3O94766 335 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 MICAL2O94851 1124 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 MYL4P12829 197 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 ELF1P32519 619 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 CTHP32929 405 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 BRCC3P46736 316 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 ARPP19P56211 112 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 GLRA4Q5JXX5 417 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 DGKKQ5KSL6 1271 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 SH3PXD2AQ5TCZ1 1133 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 RUFY3Q7L099 469 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 C3orf58Q8NDZ4 430 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 ZNF461Q8TAF7 563 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 MSANTD3Q96H12 275 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 DYDC2Q96IM9 177 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 VPS45Q9NRW7 570 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 PCDHGA5Q9Y5G8 931 aa17.09■□□□□ 0.33
LIG1-214ENST00000597146 TMEM189-UBE2V1I3L0A0 370 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 ABLIM3O94929 683 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 ARL2P36404 184 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 CLCNKBP51801 687 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 POU5F1BQ06416 359 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 CCINQ13939 588 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 TEAD2Q15562 447 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 NTRK3Q16288 839 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms