RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 PRPF40AO75400 957 aaKnown RBP16.27■□□□□ 0.2
SCN1B-204ENST00000596348 URODP06132 367 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 KCNA5P22460 613 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 CA8P35219 290 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 GLUD2P49448 558 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 UBE2HP62256 183 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 POU5F1Q01860 360 aaKnown RBP16.27■□□□□ 0.2
SCN1B-204ENST00000596348 DSG1Q02413 1049 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 KCNC3Q14003 757 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 RTP2Q5QGT7 225 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 CBWD2Q8IUF1 395 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 CD302Q8IX05 232 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 GPD1LQ8N335 351 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 SPATA20Q8TB22 786 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 NOC3LQ8WTT2 800 aaKnown RBP16.27■□□□□ 0.2
SCN1B-204ENST00000596348 DDX27Q96GQ7 796 aaKnown RBP16.27■□□□□ 0.2
SCN1B-204ENST00000596348 FAM84AQ96KN4 292 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 KCTD10Q9H3F6 313 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 ASB7Q9H672 318 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 UBQLN1Q9UMX0 589 aaKnown RBP16.27■□□□□ 0.2
SCN1B-204ENST00000596348 PCDHA5Q9Y5H7 936 aa16.27■□□□□ 0.2
SCN1B-204ENST00000596348 H3BQ06 376 aaPredicted RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 PPEF2O14830 753 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 KIAA0391O15091 583 aaKnown RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 NCK2O43639 380 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 KINO60870 393 aaKnown RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 CLASP2O75122 1294 aaKnown RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 LDHAP00338 332 aaKnown RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 CNPP09543 421 aaKnown RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 CYP3A5P20815 502 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 LRPAP1P30533 357 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 RPL9P32969 192 aaKnown RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 BRCC3P46736 316 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 CYP2J2P51589 502 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 TMEM132DQ14C87 1099 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 USP41Q3LFD5 358 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 FAM171A1Q5VUB5 890 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 SPATA1Q5VX52 437 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 EP400NLQ6ZTU2 488 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 HS2ST1Q7LGA3 356 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 C12orf56Q8IXR9 622 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 CCDC47Q96A33 483 aaKnown RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 CCDC34Q96HJ3 373 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 FBXL18Q96ME1 805 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 TSPAN18Q96SJ8 248 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 CDCA3Q99618 268 aaPredicted RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 MRPL17Q9NRX2 175 aaKnown RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 RBAKQ9NYW8 714 aaPredicted RBP16.26■□□□□ 0.19
SCN1B-204ENST00000596348 CLEC1BQ9P126 229 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 MAPK8IP1Q9UQF2 711 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 DERAQ9Y315 318 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 C2CD2Q9Y426 696 aa16.26■□□□□ 0.19
SCN1B-204ENST00000596348 PLXNA3P51805 1871 aa16.25■□□□□ 0.19
SCN1B-204ENST00000596348 IL18RAPO95256 599 aa16.25■□□□□ 0.19
SCN1B-204ENST00000596348 FGFR3P22607 806 aa16.25■□□□□ 0.19
SCN1B-204ENST00000596348 KCNQ1P51787 676 aa16.25■□□□□ 0.19
SCN1B-204ENST00000596348 SNRPFP62306 86 aaKnown RBP16.25■□□□□ 0.19
SCN1B-204ENST00000596348 BMS1Q14692 1282 aaKnown RBP16.25■□□□□ 0.19
SCN1B-204ENST00000596348 PRSS55Q6UWB4 352 aaPredicted RBP16.25■□□□□ 0.19
SCN1B-204ENST00000596348 ELOA2Q8IYF1 753 aaPredicted RBP16.25■□□□□ 0.19
SCN1B-204ENST00000596348 RIN2Q8WYP3 895 aaPredicted RBP16.25■□□□□ 0.19
SCN1B-204ENST00000596348 KLHL5Q96PQ7 755 aa16.25■□□□□ 0.19
SCN1B-204ENST00000596348 PDE11AQ9HCR9 933 aa16.25■□□□□ 0.19
SCN1B-204ENST00000596348 BARX2Q9UMQ3 279 aaPredicted RBP16.25■□□□□ 0.19
SCN1B-204ENST00000596348 HCFC2Q9Y5Z7 792 aa16.25■□□□□ 0.19
SCN1B-204ENST00000596348 TCF20Q9UGU0 1960 aaKnown RBP16.25■□□□□ 0.19
SCN1B-204ENST00000596348 PTPRJQ12913 1337 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 TEX28O15482 410 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 XPOTO43592 962 aaKnown RBP16.24■□□□□ 0.19
SCN1B-204ENST00000596348 RPL17P18621 184 aaKnown RBP16.24■□□□□ 0.19
SCN1B-204ENST00000596348 TKTP29401 623 aaKnown RBP16.24■□□□□ 0.19
SCN1B-204ENST00000596348 ELAVL2Q12926 359 aaKnown RBP16.24■□□□□ 0.19
SCN1B-204ENST00000596348 KIAA1841Q6NSI8 718 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 LLGL2Q6P1M3 1020 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
SCN1B-204ENST00000596348 CEP57Q86XR8 500 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 GUF1Q8N442 669 aaKnown RBP16.24■□□□□ 0.19
SCN1B-204ENST00000596348 XXYLT1Q8NBI6 393 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 BEST2Q8NFU1 509 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 SLC22A17Q8WUG5 538 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 ATXN2LQ8WWM7 1075 aaKnown RBP16.24■□□□□ 0.19
SCN1B-204ENST00000596348 MSLNLQ96KJ4 702 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 GSDMAQ96QA5 445 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 TTPALQ9BTX7 342 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 RXFP1Q9HBX9 757 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 DMAC2Q9NW81 257 aa16.24■□□□□ 0.19
SCN1B-204ENST00000596348 CGNQ9P2M7 1197 aaKnown RBP16.24■□□□□ 0.19
SCN1B-204ENST00000596348 ANO9A1A5B4 782 aa16.23■□□□□ 0.19
SCN1B-204ENST00000596348 ZNF233A6NK53 670 aa16.23■□□□□ 0.19
SCN1B-204ENST00000596348 PDXKO00764 312 aa16.23■□□□□ 0.19
SCN1B-204ENST00000596348 SMC2O95347 1197 aa16.23■□□□□ 0.19
SCN1B-204ENST00000596348 EPCAMP16422 314 aa16.23■□□□□ 0.19
SCN1B-204ENST00000596348 AARSP49588 968 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCN1B-204ENST00000596348 NDUFV1P49821 464 aa16.23■□□□□ 0.19
SCN1B-204ENST00000596348 MRPS5P82675 430 aaKnown RBP16.23■□□□□ 0.19
SCN1B-204ENST00000596348 CLUL1Q15846 466 aa16.23■□□□□ 0.19
SCN1B-204ENST00000596348 SNRNP35Q16560 246 aaKnown RBP16.23■□□□□ 0.19
SCN1B-204ENST00000596348 LEXMQ3ZCV2 418 aa16.23■□□□□ 0.19
SCN1B-204ENST00000596348 C9orf57Q5W0N0 161 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms