RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 PSMC2P35998 433 aaKnown RBP11.46□□□□□ -0.57
LIG1-210ENST00000596332 PPP1R2P41236 205 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 AARSP49588 968 aaKnown RBP eCLIP11.46□□□□□ -0.57
LIG1-210ENST00000596332 MARSP56192 900 aaKnown RBP11.46□□□□□ -0.57
LIG1-210ENST00000596332 ERVFC1P60507 584 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 PPP2R3AQ06190 1150 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 TYRO3Q06418 890 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 ZSCAN23Q3MJ62 389 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 CT47A1Q5JQC4 288 aaPredicted RBP11.46□□□□□ -0.57
LIG1-210ENST00000596332 URGCPQ8TCY9 931 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 FAM212AQ96EL1 285 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 GUCD1Q96NT3 240 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 MKNK1Q9BUB5 465 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 PLVAPQ9BX97 442 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 SRRTQ9BXP5 876 aaKnown RBP11.46□□□□□ -0.57
LIG1-210ENST00000596332 GPR62Q9BZJ7 368 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 ALG13Q9NP73 1137 aaKnown RBP11.46□□□□□ -0.57
LIG1-210ENST00000596332 MTUS1Q9ULD2 1270 aa11.46□□□□□ -0.57
LIG1-210ENST00000596332 REV3LO60673 3130 aa11.46□□□□□ -0.58
LIG1-210ENST00000596332 FSCN2O14926 492 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 POU3F3P20264 500 aaPredicted RBP11.45□□□□□ -0.58
LIG1-210ENST00000596332 IRS1P35568 1242 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 RNASELQ05823 741 aaKnown RBP11.45□□□□□ -0.58
LIG1-210ENST00000596332 ENPEPQ07075 957 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 TMEM132DQ14C87 1099 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 IQCB1Q15051 598 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 C9orf57Q5W0N0 161 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 DCLRE1AQ6PJP8 1040 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 TRAPPC11Q7Z392 1133 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 LIMS2Q7Z4I7 341 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 NT5DC4Q86YG4 428 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 FAM186BQ8IYM0 893 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 ENOX1Q8TC92 643 aaKnown RBP11.45□□□□□ -0.58
LIG1-210ENST00000596332 ARNTL2Q8WYA1 636 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 SLC35C1Q96A29 364 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 CCDC127Q96BQ5 260 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 CEP63Q96MT8 703 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 ZNF558Q96NG5 402 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 SAMD11Q96NU1 681 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 RPS6KC1Q96S38 1066 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 DNAJC25Q9H1X3 360 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 PRDM12Q9H4Q4 367 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 CHST7Q9NS84 486 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 SAMSN1Q9NSI8 373 aaKnown RBP11.45□□□□□ -0.58
LIG1-210ENST00000596332 MTMR10Q9NXD2 777 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 DPP3Q9NY33 737 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 SPG21Q9NZD8 308 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 UBQLN1Q9UMX0 589 aaKnown RBP11.45□□□□□ -0.58
LIG1-210ENST00000596332 FAN1Q9Y2M0 1017 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 PRG3Q9Y2Y8 225 aaPredicted RBP11.45□□□□□ -0.58
LIG1-210ENST00000596332 PCDHGC5Q9Y5F6 944 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 CITO14578 2027 aa11.45□□□□□ -0.58
LIG1-210ENST00000596332 PODXLO00592 558 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 IKBKBO14920 756 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 CETN3O15182 167 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 SLC16A3O15427 465 aaKnown RBP11.44□□□□□ -0.58
LIG1-210ENST00000596332 TRIM49P0CI25 452 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 TRIM49CP0CI26 452 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 RPL13P26373 211 aaKnown RBP11.44□□□□□ -0.58
LIG1-210ENST00000596332 RPL9P32969 192 aaKnown RBP11.44□□□□□ -0.58
LIG1-210ENST00000596332 CTNNB1P35222 781 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 BRCC3P46736 316 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 OR1G1P47890 313 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 ALDH7A1P49419 539 aaKnown RBP11.44□□□□□ -0.58
LIG1-210ENST00000596332 VAMP7P51809 220 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 BFSP1Q12934 665 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 GPM6BQ13491 265 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 HSP90AA2PQ14568 343 aaPredicted RBP11.44□□□□□ -0.58
LIG1-210ENST00000596332 TIGD5Q53EQ6 642 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 CDKAL1Q5VV42 579 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 KIAA0319Q5VV43 1072 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 TDRD10Q5VZ19 366 aaKnown RBP11.44□□□□□ -0.58
LIG1-210ENST00000596332 SV2AQ7L0J3 742 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 DDX53Q86TM3 631 aaKnown RBP11.44□□□□□ -0.58
LIG1-210ENST00000596332 WDR49Q8IV35 697 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 TRIM59Q8IWR1 403 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 DHX40Q8IX18 779 aaKnown RBP11.44□□□□□ -0.58
LIG1-210ENST00000596332 CSGALNACT2Q8N6G5 542 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 GDPD5Q8WTR4 605 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 NOC3LQ8WTT2 800 aaKnown RBP11.44□□□□□ -0.58
LIG1-210ENST00000596332 ELMO3Q96BJ8 720 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 FAM161BQ96MY7 647 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 ANP32EQ9BTT0 268 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 MTMR12Q9C0I1 747 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 XYLT2Q9H1B5 865 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 SLC38A7Q9NVC3 462 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 ANO10Q9NW15 660 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 TDRD15B5MCY1 1934 aaKnown RBP11.44□□□□□ -0.58
LIG1-210ENST00000596332 NLRC5Q86WI3 1866 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 PLXNA4Q9HCM2 1894 aa11.44□□□□□ -0.58
LIG1-210ENST00000596332 BICDL2A1A5D9 508 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 I3L4J1 428 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 TBC1D4O60343 1298 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 DLATP10515 647 aaKnown RBP11.43□□□□□ -0.58
LIG1-210ENST00000596332 ZNF18P17022 549 aa11.43□□□□□ -0.58
LIG1-210ENST00000596332 LILRA4P59901 499 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms