RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 JAKMIP3Q5VZ66 844 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 UNQ6494/PRO21346Q6UXR6 183 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 ZSCAN30Q86W11 494 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 C4orf32Q8N8J7 132 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 NLRP4Q96MN2 994 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 IER2Q9BTL4 223 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 COLEC11Q9BWP8 271 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 PLA2G2FQ9BZM2 168 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 NAT10Q9H0A0 1025 aaKnown RBP14.11□□□□□ -0.15
SCAF1-202ENST00000595242 C6orf50Q9HD87 102 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 UBN1Q9NPG3 1134 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 FBXW11Q9UKB1 542 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 DMXL2Q8TDJ6 3036 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 CCDC194A0A1B0GVG4 234 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 ARL5CA6NH57 179 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 SOBPA7XYQ1 873 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 LAD1O00515 517 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 CCL16O15467 120 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 ACTN4O43707 911 aaKnown RBP14.1□□□□□ -0.15
SCAF1-202ENST00000595242 ECI2O75521 394 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 PRPHP41219 470 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 SRSF5Q13243 272 aaKnown RBP14.1□□□□□ -0.15
SCAF1-202ENST00000595242 PTGDRQ13258 359 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 AASDHQ4L235 1098 aaPredicted RBP14.1□□□□□ -0.15
SCAF1-202ENST00000595242 PRR16Q569H4 304 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 UBXN11Q5T124 520 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 LIN9Q5TKA1 542 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 FUT10Q6P4F1 479 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 NPAS3Q8IXF0 933 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 GPR65Q8IYL9 337 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 KDF1Q8NAX2 398 aaPredicted RBP14.1□□□□□ -0.15
SCAF1-202ENST00000595242 CNNM3Q8NE01 707 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 CEP89Q96ST8 783 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 GAD1Q99259 594 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 SH2D3AQ9BRG2 576 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 PYM1Q9BRP8 204 aaKnown RBP14.1□□□□□ -0.15
SCAF1-202ENST00000595242 NIFKQ9BYG3 293 aaKnown RBP14.1□□□□□ -0.15
SCAF1-202ENST00000595242 GLT8D2Q9H1C3 349 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 IFT122Q9HBG6 1241 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 SEPT9Q9UHD8 586 aaPredicted RBP14.1□□□□□ -0.15
SCAF1-202ENST00000595242 HOOK1Q9UJC3 728 aaKnown RBP14.1□□□□□ -0.15
SCAF1-202ENST00000595242 AKAP13Q12802 2813 aa14.1□□□□□ -0.15
SCAF1-202ENST00000595242 GCN1Q92616 2671 aaKnown RBP14.09□□□□□ -0.15
SCAF1-202ENST00000595242 EML5Q05BV3 1969 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 TMEM150BA6NC51 233 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 CHURC1-FNTBB4DL54 471 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 MAN2B1O00754 1011 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 XYLBO75191 536 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 C8AP07357 584 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 ITGA4P13612 1032 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 CDC25BP30305 580 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 HOXA11P31270 313 aaPredicted RBP14.09□□□□□ -0.15
SCAF1-202ENST00000595242 CNR2P34972 360 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 CXCL12P48061 93 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 FNTBP49356 437 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 SATB1Q01826 763 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 ZNF174Q15697 407 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 PRSS55Q6UWB4 352 aaPredicted RBP14.09□□□□□ -0.15
SCAF1-202ENST00000595242 DHX40Q8IX18 779 aaKnown RBP14.09□□□□□ -0.15
SCAF1-202ENST00000595242 FAM160A2Q8N612 972 aaPredicted RBP14.09□□□□□ -0.15
SCAF1-202ENST00000595242 TRIML1Q8N9V2 468 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 SMG8Q8ND04 991 aaKnown RBP14.09□□□□□ -0.15
SCAF1-202ENST00000595242 SPATA20Q8TB22 786 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 ING5Q8WYH8 240 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 ZFP42Q96MM3 310 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 LMAN1LQ9HAT1 526 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 RRAGDQ9NQL2 400 aaPredicted RBP14.09□□□□□ -0.15
SCAF1-202ENST00000595242 HCFC1R1Q9NWW0 138 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 MIOSQ9NXC5 875 aa14.09□□□□□ -0.15
SCAF1-202ENST00000595242 ATG2BQ96BY7 2078 aa14.08□□□□□ -0.15
SCAF1-202ENST00000595242 CHMP2AO43633 222 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 KCNK5O95279 499 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 ATP2B1P20020 1258 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 HOXA9P31269 272 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 LONP1P36776 959 aaKnown RBP14.08□□□□□ -0.16
SCAF1-202ENST00000595242 MLH1P40692 756 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 SCNN1GP51170 649 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 SF3A2Q15428 464 aaKnown RBP14.08□□□□□ -0.16
SCAF1-202ENST00000595242 DPCR1Q3MIW9 517 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 PABPC1LQ4VXU2 614 aaKnown RBP14.08□□□□□ -0.16
SCAF1-202ENST00000595242 C12orf50Q8NA57 414 aaPredicted RBP14.08□□□□□ -0.16
SCAF1-202ENST00000595242 DNASE1L2Q92874 299 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 RXFP3Q9NSD7 469 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 ADAM28Q9UKQ2 775 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 ZKSCAN5Q9Y2L8 839 aa14.08□□□□□ -0.16
SCAF1-202ENST00000595242 GOLGA6L19H0YKK7 550 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 IKBKBO14920 756 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 MAFO75444 373 aaPredicted RBP14.07□□□□□ -0.16
SCAF1-202ENST00000595242 STBD1O95210 358 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 TPM3P06753 285 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 SFNP31947 248 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 CLCN1P35523 988 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 PNOCQ13519 176 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 POSTNQ15063 836 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 ZRSR1Q15695 479 aaKnown RBP14.07□□□□□ -0.16
SCAF1-202ENST00000595242 E2F4Q16254 413 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 XKR3Q5GH77 459 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 RTP2Q5QGT7 225 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 STPG1Q5TH74 334 aa14.07□□□□□ -0.16
SCAF1-202ENST00000595242 TANGO2Q6ICL3 276 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms