RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TRAF7Q6Q0C0 670 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 FAM126BQ8IXS8 530 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 SMG8Q8ND04 991 aaKnown RBP16.35■□□□□ 0.21
VRK3-207ENST00000594092 U2AF1L4Q8WU68 220 aaKnown RBP16.35■□□□□ 0.21
VRK3-207ENST00000594092 ARMC5Q96C12 935 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 DEF6Q9H4E7 631 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 APOBEC3GQ9HC16 384 aaKnown RBP16.35■□□□□ 0.21
VRK3-207ENST00000594092 CHST12Q9NRB3 414 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 C1orf112Q9NSG2 853 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 C2CD2Q9Y426 696 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 IPPQ9Y573 584 aa16.35■□□□□ 0.21
VRK3-207ENST00000594092 EIF3CLB5ME19 914 aaKnown RBP16.34■□□□□ 0.21
VRK3-207ENST00000594092 EVI5O60447 810 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 FERP16591 822 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 CTCFP49711 727 aaPredicted RBP16.34■□□□□ 0.21
VRK3-207ENST00000594092 YARSP54577 528 aaKnown RBP16.34■□□□□ 0.21
VRK3-207ENST00000594092 GCNT1Q02742 428 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 PAK2Q13177 524 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 PKN2Q16513 984 aaKnown RBP16.34■□□□□ 0.21
VRK3-207ENST00000594092 ASTE1Q2TB18 679 aaPredicted RBP16.34■□□□□ 0.21
VRK3-207ENST00000594092 C1orf127Q8N9H9 656 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 SHC3Q92529 594 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 EIF3CQ99613 913 aaKnown RBP16.34■□□□□ 0.21
VRK3-207ENST00000594092 APOL6Q9BWW8 343 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 CXCL16Q9H2A7 254 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 HAUS4Q9H6D7 363 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 SIX4Q9UIU6 781 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 R3HCC1Q9Y3T6 440 aaKnown RBP16.34■□□□□ 0.21
VRK3-207ENST00000594092 SQORQ9Y6N5 450 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 RALGAPA2Q2PPJ7 1873 aa16.34■□□□□ 0.21
VRK3-207ENST00000594092 ASS1P00966 412 aaKnown RBP16.33■□□□□ 0.21
VRK3-207ENST00000594092 TFRCP02786 760 aaKnown RBP16.33■□□□□ 0.21
VRK3-207ENST00000594092 HSPA1AP0DMV8 641 aaKnown RBP16.33■□□□□ 0.21
VRK3-207ENST00000594092 HSPA1BP0DMV9 641 aaKnown RBP16.33■□□□□ 0.21
VRK3-207ENST00000594092 AKAP5P24588 427 aa16.33■□□□□ 0.21
VRK3-207ENST00000594092 MYL6P60660 151 aa16.33■□□□□ 0.21
VRK3-207ENST00000594092 NOP14P78316 857 aaKnown RBP16.33■□□□□ 0.21
VRK3-207ENST00000594092 TRPC3Q13507 836 aa16.33■□□□□ 0.21
VRK3-207ENST00000594092 ALKAL1Q6UXT8 129 aa16.33■□□□□ 0.21
VRK3-207ENST00000594092 NT5DC4Q86YG4 428 aa16.33■□□□□ 0.21
VRK3-207ENST00000594092 FMNL3Q8IVF7 1028 aa16.33■□□□□ 0.21
VRK3-207ENST00000594092 TMEM130Q8N3G9 435 aa16.33■□□□□ 0.21
VRK3-207ENST00000594092 ZNF592Q92610 1267 aa16.33■□□□□ 0.21
VRK3-207ENST00000594092 REXO2Q9Y3B8 237 aaKnown RBP16.33■□□□□ 0.21
VRK3-207ENST00000594092 NUB1Q9Y5A7 615 aa16.33■□□□□ 0.21
VRK3-207ENST00000594092 BZW2Q9Y6E2 419 aaKnown RBP16.33■□□□□ 0.21
VRK3-207ENST00000594092 CD4P01730 458 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 KIF11P52732 1056 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 SGSM1Q2NKQ1 1148 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 ARHGAP29Q52LW3 1261 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 ENOSF1Q7L5Y1 443 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 USP38Q8NB14 1042 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 KIF18AQ8NI77 898 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 CXorf38Q8TB03 319 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 CAGE1Q8TC20 777 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 KIF12Q96FN5 646 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 FAM81BQ96LP2 452 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 ZMAT2Q96NC0 199 aaKnown RBP16.33■□□□□ 0.2
VRK3-207ENST00000594092 IMPG2Q9BZV3 1241 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 XYLT2Q9H1B5 865 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 LZTFL1Q9NQ48 299 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 FAM105AQ9NUU6 356 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 CNTN3Q9P232 1028 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 DERAQ9Y315 318 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 PAXBP1Q9Y5B6 917 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 PCDHB2Q9Y5E7 798 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 TRIP11Q15643 1979 aa16.33■□□□□ 0.2
VRK3-207ENST00000594092 UMODL1Q5DID0 1318 aa16.32■□□□□ 0.2
VRK3-207ENST00000594092 AKR1B10O60218 316 aa16.32■□□□□ 0.2
VRK3-207ENST00000594092 ZSCAN20P17040 1043 aaPredicted RBP16.32■□□□□ 0.2
VRK3-207ENST00000594092 ETF1P62495 437 aaKnown RBP16.32■□□□□ 0.2
VRK3-207ENST00000594092 PTK2Q05397 1052 aa16.32■□□□□ 0.2
VRK3-207ENST00000594092 DSC3Q14574 896 aa16.32■□□□□ 0.2
VRK3-207ENST00000594092 MBTPS1Q14703 1052 aa16.32■□□□□ 0.2
VRK3-207ENST00000594092 SPA17Q15506 151 aa16.32■□□□□ 0.2
VRK3-207ENST00000594092 ZNF571Q7Z3V5 609 aaPredicted RBP16.32■□□□□ 0.2
VRK3-207ENST00000594092 FAM71AQ8IYT1 594 aa16.32■□□□□ 0.2
VRK3-207ENST00000594092 ARID3AQ99856 593 aa16.32■□□□□ 0.2
VRK3-207ENST00000594092 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
VRK3-207ENST00000594092 ZNF263O14978 683 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 MGEA5O60502 916 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 ITGB3P05106 788 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 KRT19P08727 400 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 GUCY2FP51841 1108 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 CUL2Q13617 745 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 ZBTB6Q15916 424 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 XKR4Q5GH76 650 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 SYT10Q6XYQ8 523 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 A0A0U1RQJ8 604 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 CLSTN1O94985 981 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 LCA5LO95447 670 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 CCDC172P0C7W6 258 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 USP8P40818 1118 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 ATN1P54259 1190 aaPredicted RBP16.31■□□□□ 0.2
VRK3-207ENST00000594092 CYP27A1Q02318 531 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 BFSP2Q13515 415 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 ZNF699Q32M78 642 aa16.31■□□□□ 0.2
VRK3-207ENST00000594092 SLC39A5Q6ZMH5 540 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms