RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ASS1P00966 412 aaKnown RBP22.39■■□□□ 1.17
PNKP-203ENST00000593946 CLCN1P35523 988 aa22.39■■□□□ 1.17
PNKP-203ENST00000593946 NOP14P78316 857 aaKnown RBP22.39■■□□□ 1.17
PNKP-203ENST00000593946 NFX1Q12986 1120 aaKnown RBP22.39■■□□□ 1.17
PNKP-203ENST00000593946 LPIN1Q14693 890 aa22.39■■□□□ 1.17
PNKP-203ENST00000593946 C1orf127Q8N9H9 656 aa22.39■■□□□ 1.17
PNKP-203ENST00000593946 CRISPLD2Q9H0B8 497 aa22.39■■□□□ 1.17
PNKP-203ENST00000593946 DEF6Q9H4E7 631 aa22.39■■□□□ 1.17
PNKP-203ENST00000593946 APOBEC3GQ9HC16 384 aaKnown RBP22.39■■□□□ 1.17
PNKP-203ENST00000593946 GHRP10912 638 aa22.38■■□□□ 1.17
PNKP-203ENST00000593946 YARSP54577 528 aaKnown RBP22.38■■□□□ 1.17
PNKP-203ENST00000593946 PTK2Q05397 1052 aa22.38■■□□□ 1.17
PNKP-203ENST00000593946 SPOPLQ6IQ16 392 aa22.38■■□□□ 1.17
PNKP-203ENST00000593946 TRAF7Q6Q0C0 670 aa22.38■■□□□ 1.17
PNKP-203ENST00000593946 ALKAL1Q6UXT8 129 aa22.38■■□□□ 1.17
PNKP-203ENST00000593946 SMG8Q8ND04 991 aaKnown RBP22.38■■□□□ 1.17
PNKP-203ENST00000593946 IMPG2Q9BZV3 1241 aa22.38■■□□□ 1.17
PNKP-203ENST00000593946 SIX4Q9UIU6 781 aa22.38■■□□□ 1.17
PNKP-203ENST00000593946 PADI3Q9ULW8 664 aa22.38■■□□□ 1.17
PNKP-203ENST00000593946 DERAQ9Y315 318 aa22.38■■□□□ 1.17
PNKP-203ENST00000593946 IPPQ9Y573 584 aa22.38■■□□□ 1.17
PNKP-203ENST00000593946 ZNF263O14978 683 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 AKR1B10O60218 316 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 CCDC172P0C7W6 258 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 CD52P31358 61 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 MYL6P60660 151 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 NYAP1Q6ZVC0 841 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 ZNF571Q7Z3V5 609 aaPredicted RBP22.37■■□□□ 1.17
PNKP-203ENST00000593946 FAM126BQ8IXS8 530 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 FAM71AQ8IYT1 594 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 USP38Q8NB14 1042 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 CXorf38Q8TB03 319 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 CNTN3Q9P232 1028 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 NUB1Q9Y5A7 615 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 GOLGA6L9A6NEM1 432 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 KRT83P78385 493 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 PAK2Q13177 524 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 TRPC3Q13507 836 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 SGSM1Q2NKQ1 1148 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 ARMC5Q96C12 935 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 XYLT2Q9H1B5 865 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 CXCL16Q9H2A7 254 aa22.37■■□□□ 1.17
PNKP-203ENST00000593946 SCN1AP35498 2009 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 IPO7O95373 1038 aaKnown RBP22.36■■□□□ 1.17
PNKP-203ENST00000593946 AKAP5P24588 427 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 ANXA13P27216 316 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 MNX1P50219 401 aaPredicted RBP22.36■■□□□ 1.17
PNKP-203ENST00000593946 LBX1P52954 281 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 CUL2Q13617 745 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 PKN2Q16513 984 aaKnown RBP22.36■■□□□ 1.17
PNKP-203ENST00000593946 XKR4Q5GH76 650 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 CAGE1Q8TC20 777 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 U2AF1L4Q8WU68 220 aaKnown RBP22.36■■□□□ 1.17
PNKP-203ENST00000593946 JAKMIP2Q96AA8 810 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 KIF12Q96FN5 646 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 ARID3AQ99856 593 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 RNF39Q9H2S5 420 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 PCDHB2Q9Y5E7 798 aa22.36■■□□□ 1.17
PNKP-203ENST00000593946 UMODL1Q5DID0 1318 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 SGPL1O95470 568 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 CD4P01730 458 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 TBXAS1P24557 533 aaPredicted RBP22.35■■□□□ 1.17
PNKP-203ENST00000593946 CYP27A1Q02318 531 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 ZBTB6Q15916 424 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 SLC18A3Q16572 532 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 TAF4BQ92750 862 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 C16orf45Q96MC5 204 aaPredicted RBP22.35■■□□□ 1.17
PNKP-203ENST00000593946 ZMAT2Q96NC0 199 aaKnown RBP22.35■■□□□ 1.17
PNKP-203ENST00000593946 SYT11Q9BT88 431 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 APOL6Q9BWW8 343 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 FAM105AQ9NUU6 356 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 ITGA11Q9UKX5 1188 aa22.35■■□□□ 1.17
PNKP-203ENST00000593946 A0A0U1RQJ8 604 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 ITGB3P05106 788 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 GFPT1Q06210 699 aaPredicted RBP22.34■■□□□ 1.17
PNKP-203ENST00000593946 DSC3Q14574 896 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 SPA17Q15506 151 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 OLIG1Q8TAK6 271 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 ATRIPQ8WXE1 791 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 TSPAN18Q96SJ8 248 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 TRAIPQ9BWF2 469 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 TANC1Q9C0D5 1861 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 A0A087X0T9 212 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 FAM228BP0C875 321 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 ZSCAN20P17040 1043 aaPredicted RBP22.34■■□□□ 1.17
PNKP-203ENST00000593946 MBTPS1Q14703 1052 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 ZNF699Q32M78 642 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 TMEM130Q8N3G9 435 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 DPP3Q9NY33 737 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 ADAMTS1Q9UHI8 967 aa22.34■■□□□ 1.17
PNKP-203ENST00000593946 KIAA0100Q14667 2235 aaKnown RBP22.33■■□□□ 1.17
PNKP-203ENST00000593946 MGEA5O60502 916 aa22.33■■□□□ 1.17
PNKP-203ENST00000593946 OFD1O75665 1012 aa22.33■■□□□ 1.17
PNKP-203ENST00000593946 KRT19P08727 400 aa22.33■■□□□ 1.17
PNKP-203ENST00000593946 KCNE1P15382 129 aa22.33■■□□□ 1.17
PNKP-203ENST00000593946 CTCFP49711 727 aaPredicted RBP22.33■■□□□ 1.17
PNKP-203ENST00000593946 PTPN14Q15678 1187 aa22.33■■□□□ 1.17
PNKP-203ENST00000593946 ZNF662Q6ZS27 426 aa22.33■■□□□ 1.17
PNKP-203ENST00000593946 NIF3L1Q9GZT8 377 aa22.33■■□□□ 1.17
PNKP-203ENST00000593946 VRTNQ9H8Y1 702 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms