RNA–Protein interactions for RNA: ENST00000593241.5

RFX2-224, Transcript of regulatory factor X2, human

TSL 3

Gene RFX2, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-224	ENST00000593241	CNOT6L	Q96LI5	555 aa	Known RBP	21.33	■■□□□ 1.01
RFX2-224	ENST00000593241	TGS1	Q96RS0	853 aa	Known RBP	21.33	■■□□□ 1.01
RFX2-224	ENST00000593241	R3HCC1	Q9Y3T6	440 aa	Known RBP	21.33	■■□□□ 1.01
RFX2-224	ENST00000593241	TDRD15	B5MCY1	1934 aa	Known RBP	21.33	■■□□□ 1
RFX2-224	ENST00000593241	TRIP11	Q15643	1979 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	B4GALT3	O60512	393 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	GALT	P07902	379 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	TRIM49	P0CI25	452 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	TRIM49C	P0CI26	452 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	LRPAP1	P30533	357 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	GTF2H1	P32780	548 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	CTNNB1	P35222	781 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	PPM1A	P35813	382 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	BMPR1A	P36894	532 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	SLC11A1	P49279	550 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	MCCD1	P59942	119 aa	Predicted RBP	21.32	■■□□□ 1
RFX2-224	ENST00000593241	DLG4	P78352	724 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	TAP1	Q03518	808 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	SOX4	Q06945	474 aa	Predicted RBP	21.32	■■□□□ 1
RFX2-224	ENST00000593241	IRF2BP1	Q8IU81	584 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	OR5B17	Q8NGF7	314 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	MTMR12	Q9C0I1	747 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	GOLGA2P5	Q9HBQ8	144 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	SAMSN1	Q9NSI8	373 aa	Known RBP	21.32	■■□□□ 1
RFX2-224	ENST00000593241	FANCL	Q9NW38	375 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	ITGA11	Q9UKX5	1188 aa		21.32	■■□□□ 1
RFX2-224	ENST00000593241	PTPRJ	Q12913	1337 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	ANK1	P16157	1881 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	NRP1	O14786	923 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	PHACTR2	O75167	634 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	EEF1G	P26641	437 aa	Known RBP	21.31	■■□□□ 1
RFX2-224	ENST00000593241	MTIF2	P46199	727 aa	Known RBP	21.31	■■□□□ 1
RFX2-224	ENST00000593241	CLCNKB	P51801	687 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	GUCY2F	P51841	1108 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	TPM4	P67936	248 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	BIRC3	Q13489	604 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	NCAPH	Q15003	741 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	DCLRE1A	Q6PJP8	1040 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	TRAPPC11	Q7Z392	1133 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	FAM200A	Q8TCP9	573 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	PLVAP	Q9BX97	442 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	CBX8	Q9HC52	389 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	SPG21	Q9NZD8	308 aa		21.31	■■□□□ 1
RFX2-224	ENST00000593241	PRG3	Q9Y2Y8	225 aa	Predicted RBP	21.31	■■□□□ 1
RFX2-224	ENST00000593241	GBF1	Q92538	1859 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	KCNJ18	B7U540	433 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	PODXL	O00592	558 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	ARHGEF15	O94989	841 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	RB1	P06400	928 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	ERVK-21	P61565	698 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	RBP5	P82980	135 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	KCNJ12	Q14500	433 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	IQCB1	Q15051	598 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	UPP1	Q16831	310 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	HSP90AA4P	Q58FG1	418 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	C1orf220	Q5T0J3	134 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	TRIM59	Q8IWR1	403 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	DHX40	Q8IX18	779 aa	Known RBP	21.3	■■□□□ 1
RFX2-224	ENST00000593241	ANKRD20A12P	Q8NF67	263 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	ZNF516	Q92618	1163 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	C17orf80	Q9BSJ5	609 aa		21.3	■■□□□ 1
RFX2-224	ENST00000593241	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	21.3	■■□□□ 1
RFX2-224	ENST00000593241	PDCD11	Q14690	1871 aa	Known RBP	21.3	■■□□□ 1
RFX2-224	ENST00000593241	NT5C1B-RDH14	C9J2C7	533 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	GOLGA6L19	H0YKK7	550 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	B3GAT3	O94766	335 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	ITGB3	P05106	788 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	KRT19	P08727	400 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	LINC00271	P0C7V0	271 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	CDK11B	P21127	795 aa	Known RBP	21.29	■■□□□ 1
RFX2-224	ENST00000593241	PBX3	P40426	434 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	GCLM	P48507	274 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	EPC2	Q52LR7	807 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	CDKAL1	Q5VV42	579 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	C9orf57	Q5W0N0	161 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	SV2A	Q7L0J3	742 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	SLC39A11	Q8N1S5	342 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	C1orf127	Q8N9H9	656 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	RABGGTA	Q92696	567 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	SLC35C1	Q96A29	364 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	TMEM169	Q96HH4	297 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	PAAF1	Q9BRP4	392 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	MMRN2	Q9H8L6	949 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	TMEM8A	Q9HCN3	771 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	CACNG4	Q9UBN1	327 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	MTUS1	Q9ULD2	1270 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	AGAP1	Q9UPQ3	857 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	RANBP2	P49792	3224 aa	Known RBP	21.29	■■□□□ 1
RFX2-224	ENST00000593241	TRIOBP	Q9H2D6	2365 aa		21.29	■■□□□ 1
RFX2-224	ENST00000593241	ANO9	A1A5B4	782 aa		21.28	■■□□□ 1
RFX2-224	ENST00000593241	TMEM189-UBE2V1	I3L0A0	370 aa		21.28	■■□□□ 1
RFX2-224	ENST00000593241	N4BP1	O75113	896 aa	Known RBP	21.28	■■□□□ 1
RFX2-224	ENST00000593241	TADA2A	O75478	443 aa		21.28	■■□□□ 1
RFX2-224	ENST00000593241	C4BPA	P04003	597 aa	Known RBP	21.28	■■□□□ 1
RFX2-224	ENST00000593241	TPM2	P07951	284 aa		21.28	■■□□□ 1
RFX2-224	ENST00000593241	PAX3	P23760	479 aa		21.28	■■□□□ 1
RFX2-224	ENST00000593241	POLR2B	P30876	1174 aa	Known RBP	21.28	■■□□□ 1
RFX2-224	ENST00000593241	KRT17	Q04695	432 aa		21.28	■■□□□ 1
RFX2-224	ENST00000593241	PPP3CA	Q08209	521 aa		21.28	■■□□□ 1
RFX2-224	ENST00000593241	TRPC3	Q13507	836 aa		21.28	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms