RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 VIMP08670 466 aaKnown RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 ABHD2P08910 425 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 PPP1R2P3Q6NXS1 205 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 CRELD2Q6UXH1 353 aaPredicted RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 CEP128Q6ZU80 1094 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 POMGNT1Q8WZA1 660 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 GPRASP2Q96D09 838 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 MYCBPQ99417 103 aaPredicted RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 SH2D3AQ9BRG2 576 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 KIFC3Q9BVG8 833 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 C1orf112Q9NSG2 853 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 ARHGAP28Q9P2N2 729 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 MCM8Q9UJA3 840 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 STYXL1Q9Y6J8 313 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 LCTP09848 1927 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 H0YCG3 227 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 ACSL3O95573 720 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 ATF2P15336 505 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 EIF2AK2P19525 551 aaKnown RBP12.36□□□□□ -0.43
ZNF540-210ENST00000592533 RRM1P23921 792 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 PSMD6Q15008 389 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 OTUD6AQ7L8S5 288 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 NINJ2Q9NZG7 142 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 CNTN6Q9UQ52 1028 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 PCDHA10Q9Y5I2 948 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 PHIPQ8WWQ0 1821 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 MAFGO15525 162 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 C21orf2O43822 256 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 DKC1O60832 514 aaKnown RBP eCLIP12.36□□□□□ -0.43
ZNF540-210ENST00000592533 ZACNQ401N2 412 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 CCDC38Q502W7 563 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 TAS1R3Q7RTX0 852 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 RIBC1Q8N443 379 aaPredicted RBP12.36□□□□□ -0.43
ZNF540-210ENST00000592533 MCPH1Q8NEM0 835 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 ZNF516Q92618 1163 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 TRIM7Q9C029 511 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 PRKAG3Q9UGI9 489 aa12.36□□□□□ -0.43
ZNF540-210ENST00000592533 EXTL3O43909 919 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 FDX1P10109 184 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 KRT5P13647 590 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 ACO1P21399 889 aaKnown RBP12.35□□□□□ -0.43
ZNF540-210ENST00000592533 CCDC89Q8N998 374 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 ATG4AQ8WYN0 398 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.35□□□□□ -0.43
ZNF540-210ENST00000592533 TCEAL9Q9UHQ7 104 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 ANAPC5Q9UJX4 755 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 R3HDM2Q9Y2K5 976 aaKnown RBP12.35□□□□□ -0.43
ZNF540-210ENST00000592533 CDH16O75309 829 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 DGAT1O75907 488 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 SUN1O94901 812 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 ATP6V1G2O95670 118 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 KLRC2P26717 231 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 MAP2K2P36507 400 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 IFNAR2P48551 515 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 SNX1Q13596 522 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 PHF13Q86YI8 300 aaPredicted RBP12.35□□□□□ -0.43
ZNF540-210ENST00000592533 RHOT1Q8IXI2 618 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 CCDC63Q8NA47 563 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 AGBL3Q8NEM8 1001 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 EXD1Q8NHP7 514 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 RMDN3Q96TC7 470 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 RAVER2Q9HCJ3 691 aaKnown RBP12.35□□□□□ -0.43
ZNF540-210ENST00000592533 ABCF3Q9NUQ8 709 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 ZNF862O60290 1169 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 C4BPAP04003 597 aaKnown RBP12.35□□□□□ -0.43
ZNF540-210ENST00000592533 ALADP13716 330 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 NSFP46459 744 aaKnown RBP12.35□□□□□ -0.43
ZNF540-210ENST00000592533 NEDD9Q14511 834 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 ZNF268Q14587 947 aaPredicted RBP12.35□□□□□ -0.43
ZNF540-210ENST00000592533 STAT4Q14765 748 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 CCDC142Q17RM4 750 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 PLEKHA7Q6IQ23 1121 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 HIBCHQ6NVY1 386 aaPredicted RBP12.35□□□□□ -0.43
ZNF540-210ENST00000592533 DRICH1Q6PGQ1 229 aaPredicted RBP12.35□□□□□ -0.43
ZNF540-210ENST00000592533 VSIG10LQ86VR7 867 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 ATP6V0A1Q93050 837 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 VPS33BQ9H267 617 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 VEZTQ9HBM0 779 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 KCNG1Q9UIX4 513 aa12.35□□□□□ -0.43
ZNF540-210ENST00000592533 TCP11X1B4DZS4 312 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 HNRNPDLO14979 420 aaKnown RBP12.34□□□□□ -0.43
ZNF540-210ENST00000592533 THAP12O43422 761 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 NOMO3P69849 1222 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 KYNUQ16719 465 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 SMYD5Q6GMV2 418 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
ZNF540-210ENST00000592533 MAGEB18Q96M61 343 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 MRPL47Q9HD33 250 aaKnown RBP12.34□□□□□ -0.43
ZNF540-210ENST00000592533 XPNPEP1Q9NQW7 623 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 FGFR1OP2Q9NVK5 253 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 ARL2BPQ9Y2Y0 163 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 PIGRP01833 764 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 RALAP11233 206 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 CREB1P16220 341 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 ADCY8P40145 1251 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 SLC18A1P54219 525 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 NCALDP61601 193 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 C1QBPQ07021 282 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms