RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TBXAS1P24557 533 aaPredicted RBP16.85■□□□□ 0.29
MBD1-227ENST00000592060 FLT3P36888 993 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 HSD17B3P37058 310 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 TNFSF9P41273 254 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 TTLL12Q14166 644 aaPredicted RBP16.85■□□□□ 0.29
MBD1-227ENST00000592060 KCTD2Q14681 263 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 CYP1B1Q16678 543 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 SCARA3Q6AZY7 606 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 MON1BQ7L1V2 547 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 LRRC45Q96CN5 670 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 TRIM11Q96F44 468 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 DPH5Q9H2P9 285 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 MGAMO43451 1857 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 PLXNA1Q9UIW2 1896 aa16.85■□□□□ 0.29
MBD1-227ENST00000592060 NOP56O00567 594 aaKnown RBP16.84■□□□□ 0.29
MBD1-227ENST00000592060 PRKCBP05771 671 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 YBX3P16989 372 aaKnown RBP eCLIP16.84■□□□□ 0.29
MBD1-227ENST00000592060 CHRNA3P32297 505 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 GJA5P36382 358 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 NCOA4Q13772 614 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 MXD4Q14582 209 aaPredicted RBP16.84■□□□□ 0.29
MBD1-227ENST00000592060 SIX1Q15475 284 aaPredicted RBP16.84■□□□□ 0.29
MBD1-227ENST00000592060 LRIG3Q6UXM1 1119 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 FASTKD5Q7L8L6 764 aaKnown RBP16.84■□□□□ 0.29
MBD1-227ENST00000592060 SLC13A5Q86YT5 568 aaPredicted RBP16.84■□□□□ 0.29
MBD1-227ENST00000592060 JAMLQ86YT9 394 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 WDR49Q8IV35 697 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 LRRC71Q8N4P6 559 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 C1orf131Q8NDD1 294 aaKnown RBP16.84■□□□□ 0.29
MBD1-227ENST00000592060 ZC3H15Q8WU90 426 aaKnown RBP16.84■□□□□ 0.29
MBD1-227ENST00000592060 CPA5Q8WXQ8 436 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 ERP44Q9BS26 406 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 MROH8Q9H579 483 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 PCYOX1Q9UHG3 505 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 PLAAQ9Y263 795 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 PCDHB4Q9Y5E5 795 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 LOC102724159A0A0B4J2E5 919 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 H0YGN5 161 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 CFHP08603 1231 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 RRM1P23921 792 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 ZNF132P52740 706 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 AP3M2P53677 418 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 HNRNPH2P55795 449 aaKnown RBP16.84■□□□□ 0.29
MBD1-227ENST00000592060 NOMO3P69849 1222 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 MCL1Q07820 350 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 PWP2Q15269 919 aaKnown RBP16.84■□□□□ 0.29
MBD1-227ENST00000592060 ZSCAN26Q16670 478 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 TRIM72Q6ZMU5 477 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 TMC3Q7Z5M5 1100 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 ZBTB8OSQ8IWT0 167 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 EFCAB13Q8IY85 973 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 EXOC8Q8IYI6 725 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 RBBP8NLQ8NC74 664 aaPredicted RBP16.84■□□□□ 0.29
MBD1-227ENST00000592060 COPS5Q92905 334 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 C18orf8Q96DM3 657 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 SPATA33Q96N06 139 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 TRIM7Q9C029 511 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 ANAPC7Q9UJX3 599 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 NFS1Q9Y697 457 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 PLXNB2O15031 1838 aa16.84■□□□□ 0.29
MBD1-227ENST00000592060 TCRBV7S2A1N4TA0A589 114 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 OGTO15294 1046 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 ASS1P00966 412 aaKnown RBP16.83■□□□□ 0.28
MBD1-227ENST00000592060 PROZP22891 400 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 MAPK4P31152 587 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 RWDD2BP57060 319 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 TMEM63BQ5T3F8 832 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 TTC27Q6P3X3 843 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 TMEM270Q6UE05 265 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 ZBTB33Q86T24 672 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 DHX37Q8IY37 1157 aaKnown RBP16.83■□□□□ 0.28
MBD1-227ENST00000592060 ABRAQ8N0Z2 381 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 RNF149Q8NC42 400 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 SHCBP1Q8NEM2 672 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 CYFIP2Q96F07 1278 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 TXLNGYQ9BZA5 131 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 C2orf40Q9H1Z8 148 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 ZDHHC18Q9NUE0 388 aa16.83■□□□□ 0.28
MBD1-227ENST00000592060 SRGAP2CP0DJJ0 459 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 GNA15P30679 374 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 EPHX2P34913 555 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 NSFP46459 744 aaKnown RBP16.82■□□□□ 0.28
MBD1-227ENST00000592060 DRG2P55039 364 aaKnown RBP16.82■□□□□ 0.28
MBD1-227ENST00000592060 SKOR1P84550 965 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 LEKR1Q6ZMV7 388 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 C12orf50Q8NA57 414 aaPredicted RBP16.82■□□□□ 0.28
MBD1-227ENST00000592060 CPSF3Q9UKF6 684 aaKnown RBP16.82■□□□□ 0.28
MBD1-227ENST00000592060 SLC26A2P50443 739 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 PTP4A2Q12974 167 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 MTMR3Q13615 1198 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 MAPK6Q16659 721 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 LLGL2Q6P1M3 1020 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 LRRC31Q6UY01 552 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 PHF13Q86YI8 300 aaPredicted RBP16.82■□□□□ 0.28
MBD1-227ENST00000592060 TRAPPC12Q8WVT3 735 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 MAGOHBQ96A72 148 aaKnown RBP16.82■□□□□ 0.28
MBD1-227ENST00000592060 TRIM31Q9BZY9 425 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 PTPRHQ9HD43 1115 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 CALCOCO1Q9P1Z2 691 aa16.82■□□□□ 0.28
MBD1-227ENST00000592060 LDLRAD1Q5T700 205 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms