RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 SHC4Q6S5L8 630 aa19.03■□□□□ 0.64
CIRBP-235ENST00000591935 LRRC15Q8TF66 581 aa19.03■□□□□ 0.64
CIRBP-235ENST00000591935 ZBTB45Q96K62 511 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-235ENST00000591935 UROC1Q96N76 676 aa19.03■□□□□ 0.64
CIRBP-235ENST00000591935 PPP1R10Q96QC0 940 aaKnown RBP19.03■□□□□ 0.64
CIRBP-235ENST00000591935 TTPALQ9BTX7 342 aa19.03■□□□□ 0.64
CIRBP-235ENST00000591935 CCDC94Q9BW85 323 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-235ENST00000591935 CBX8Q9HC52 389 aa19.03■□□□□ 0.64
CIRBP-235ENST00000591935 ZDHHC7Q9NXF8 308 aa19.03■□□□□ 0.64
CIRBP-235ENST00000591935 KIAA1468Q9P260 1216 aa19.03■□□□□ 0.64
CIRBP-235ENST00000591935 FBXO2Q9UK22 296 aaPredicted RBP19.03■□□□□ 0.64
CIRBP-235ENST00000591935 ABLIM1O14639 778 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 TGM5O43548 720 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 PAPLNO95428 1278 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 HOXD11P31277 338 aaPredicted RBP19.02■□□□□ 0.64
CIRBP-235ENST00000591935 GRM5P41594 1212 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 ZNF165P49910 485 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 SMTNP53814 917 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 CACNB1Q02641 598 aaPredicted RBP19.02■□□□□ 0.64
CIRBP-235ENST00000591935 ZNF568Q3ZCX4 644 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 CD300LGQ6UXG3 332 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 CEP57Q86XR8 500 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 LNX1Q8TBB1 728 aaPredicted RBP19.02■□□□□ 0.64
CIRBP-235ENST00000591935 AK8Q96MA6 479 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 NAT10Q9H0A0 1025 aaKnown RBP19.02■□□□□ 0.64
CIRBP-235ENST00000591935 GOLGA2P5Q9HBQ8 144 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 WDR6Q9NNW5 1121 aaKnown RBP19.02■□□□□ 0.64
CIRBP-235ENST00000591935 KMT2EQ8IZD2 1858 aa19.02■□□□□ 0.64
CIRBP-235ENST00000591935 DOCK8Q8NF50 2099 aa19.02■□□□□ 0.63
CIRBP-235ENST00000591935 PDCD11Q14690 1871 aaKnown RBP19.01■□□□□ 0.63
CIRBP-235ENST00000591935 SMIM28A0A1B0GU29 152 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 TMEM189-UBE2V1I3L0A0 370 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 MEFVO15553 781 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-235ENST00000591935 ADCY5O95622 1261 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 PLS3P13797 630 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 PROZP22891 400 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 CLCNKBP51801 687 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 SOX4Q06945 474 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-235ENST00000591935 STRN3Q13033 797 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 XKR4Q5GH76 650 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 DCLRE1AQ6PJP8 1040 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 ALKAL1Q6UXT8 129 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 ZSCAN30Q86W11 494 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 TMEM161BQ8NDZ6 487 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 SPIRE2Q8WWL2 714 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 PIK3R5Q8WYR1 880 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 ZNF707Q96C28 371 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-235ENST00000591935 BPIFA3Q9BQP9 254 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 CLSTN3Q9BQT9 956 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 TCHPQ9BT92 498 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 PIDD1Q9HB75 910 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 SLC38A7Q9NVC3 462 aa19.01■□□□□ 0.63
CIRBP-235ENST00000591935 HOOK1Q9UJC3 728 aaKnown RBP19.01■□□□□ 0.63
CIRBP-235ENST00000591935 ADAM12O43184 909 aa19■□□□□ 0.63
CIRBP-235ENST00000591935 TRAPPC3O43617 180 aa19■□□□□ 0.63
CIRBP-235ENST00000591935 PDGFBP01127 241 aaPredicted RBP19■□□□□ 0.63
CIRBP-235ENST00000591935 TPM3P06753 285 aa19■□□□□ 0.63
CIRBP-235ENST00000591935 MCF2P10911 925 aa19■□□□□ 0.63
CIRBP-235ENST00000591935 NUBP1P53384 320 aa19■□□□□ 0.63
CIRBP-235ENST00000591935 IER5LQ5T953 404 aa19■□□□□ 0.63
CIRBP-235ENST00000591935 PDZRN4Q6ZMN7 1036 aaPredicted RBP19■□□□□ 0.63
CIRBP-235ENST00000591935 SMG7Q92540 1137 aaKnown RBP19■□□□□ 0.63
CIRBP-235ENST00000591935 DDX27Q96GQ7 796 aaKnown RBP19■□□□□ 0.63
CIRBP-235ENST00000591935 ZMAT2Q96NC0 199 aaKnown RBP19■□□□□ 0.63
CIRBP-235ENST00000591935 USP25Q9UHP3 1055 aa19■□□□□ 0.63
CIRBP-235ENST00000591935 KCNH3Q9ULD8 1083 aa19■□□□□ 0.63
CIRBP-235ENST00000591935 H0YCG3 227 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 N4BP1O75113 896 aaKnown RBP18.99■□□□□ 0.63
CIRBP-235ENST00000591935 B3GAT3O94766 335 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 MAPTP10636 758 aaKnown RBP18.99■□□□□ 0.63
CIRBP-235ENST00000591935 UBA7P41226 1012 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 PTPN5P54829 565 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 NHLH1Q02575 133 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 DHX8Q14562 1220 aaKnown RBP18.99■□□□□ 0.63
CIRBP-235ENST00000591935 PSMD5Q16401 504 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 UPP1Q16831 310 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 SEZ6Q53EL9 994 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 MPZL3Q6UWV2 235 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 CEP57L1Q8IYX8 460 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 C3orf58Q8NDZ4 430 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 CALML4Q96GE6 196 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 CCDC34Q96HJ3 373 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 ACAP3Q96P50 834 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 DNAJC25Q9H1X3 360 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 BLOC1S4Q9NUP1 217 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 IGSF9Q9P2J2 1179 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 LARSQ9P2J5 1176 aaKnown RBP18.99■□□□□ 0.63
CIRBP-235ENST00000591935 CLUHO75153 1309 aa18.99■□□□□ 0.63
CIRBP-235ENST00000591935 I3L4J1 428 aa18.98■□□□□ 0.63
CIRBP-235ENST00000591935 HARSP12081 509 aaKnown RBP18.98■□□□□ 0.63
CIRBP-235ENST00000591935 SCP2P22307 547 aa18.98■□□□□ 0.63
CIRBP-235ENST00000591935 FGFR3P22607 806 aa18.98■□□□□ 0.63
CIRBP-235ENST00000591935 BRCC3P46736 316 aa18.98■□□□□ 0.63
CIRBP-235ENST00000591935 NLRP12P59046 1061 aa18.98■□□□□ 0.63
CIRBP-235ENST00000591935 TDGQ13569 410 aa18.98■□□□□ 0.63
CIRBP-235ENST00000591935 IQCB1Q15051 598 aa18.98■□□□□ 0.63
CIRBP-235ENST00000591935 LIN9Q5TKA1 542 aa18.98■□□□□ 0.63
CIRBP-235ENST00000591935 CLIC6Q96NY7 704 aa18.98■□□□□ 0.63
CIRBP-235ENST00000591935 PYM1Q9BRP8 204 aaKnown RBP18.98■□□□□ 0.63
CIRBP-235ENST00000591935 PRKD2Q9BZL6 878 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms