RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 WNT16Q9UBV4 365 aa25.26■■□□□ 1.63
LSM7-206ENST00000591515 ACACBO00763 2458 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 STK25O00506 426 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 B4GALT3O60512 393 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 NPTXRO95502 500 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 ITGA4P13612 1032 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 LIG4P49917 911 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 PSMD2Q13200 908 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 CUL4BQ13620 913 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 FAM26FQ5R3K3 315 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 UBXN11Q5T124 520 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 GLB1LQ6UWU2 654 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 MRPL10Q7Z7H8 261 aaKnown RBP25.25■■□□□ 1.63
LSM7-206ENST00000591515 ENGASEQ8NFI3 743 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 KLHL5Q96PQ7 755 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 ACCSQ96QU6 501 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 ACO2Q99798 780 aaKnown RBP25.25■■□□□ 1.63
LSM7-206ENST00000591515 TMEM206Q9H813 350 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 DNAJB4Q9UDY4 337 aa25.25■■□□□ 1.63
LSM7-206ENST00000591515 HNRNPDLO14979 420 aaKnown RBP25.24■■□□□ 1.63
LSM7-206ENST00000591515 TOM1L1O75674 476 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 MATR3P43243 847 aaKnown RBP eCLIP25.24■■□□□ 1.63
LSM7-206ENST00000591515 ZNF568Q3ZCX4 644 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 NT5DC1Q5TFE4 455 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 C15orf39Q6ZRI6 1047 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 MAP4K3Q8IVH8 894 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 ELOA2Q8IYF1 753 aaPredicted RBP25.24■■□□□ 1.63
LSM7-206ENST00000591515 GRAMD1CQ8IYS0 662 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 FIZ1Q96SL8 496 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 TARS2Q9BW92 718 aaKnown RBP25.24■■□□□ 1.63
LSM7-206ENST00000591515 TBC1D17Q9HA65 648 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 DLL3Q9NYJ7 618 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 TBC1D7Q9P0N9 293 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 CA14Q9ULX7 337 aa25.24■■□□□ 1.63
LSM7-206ENST00000591515 CARNS1A5YM72 827 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 MEIS3P2A8K0S8 358 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 GADD45BO75293 160 aaPredicted RBP25.23■■□□□ 1.63
LSM7-206ENST00000591515 KRT37O76014 449 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 SMC2O95347 1197 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 CNPP09543 421 aaKnown RBP25.23■■□□□ 1.63
LSM7-206ENST00000591515 MCF2P10911 925 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 KLRC2P26717 231 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 SLC11A1P49279 550 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 SNW1Q13573 536 aaKnown RBP25.23■■□□□ 1.63
LSM7-206ENST00000591515 POSTNQ15063 836 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 MPZL3Q6UWV2 235 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 TAS1R3Q7RTX0 852 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 URGCPQ8TCY9 931 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 HINFPQ9BQA5 517 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 GTPBP4Q9BZE4 634 aaKnown RBP25.23■■□□□ 1.63
LSM7-206ENST00000591515 RMND1Q9NWS8 449 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 INPP5FQ9Y2H2 1132 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 IPPQ9Y573 584 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 DOCK6Q96HP0 2047 aa25.23■■□□□ 1.63
LSM7-206ENST00000591515 ZMYM2Q9UBW7 1377 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 UBE4BO95155 1302 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 PATJQ8NI35 1801 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 EIF3DO15371 548 aaKnown RBP eCLIP25.22■■□□□ 1.63
LSM7-206ENST00000591515 CLDN3O15551 220 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 KIF20AO95235 890 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 PIGRP01833 764 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 RFX1P22670 979 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 KYAT1Q16773 422 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 NOMO2Q5JPE7 1267 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 L1TD1Q5T7N2 865 aaKnown RBP25.22■■□□□ 1.63
LSM7-206ENST00000591515 SLFN12LQ6IEE8 588 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 SYCP3Q8IZU3 236 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 DCLK2Q8N568 766 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 EMILIN2Q9BXX0 1053 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 EIF2AQ9BY44 585 aaKnown RBP25.22■■□□□ 1.63
LSM7-206ENST00000591515 GBP3Q9H0R5 595 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 RSAD1Q9HA92 442 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 DLGAP2Q9P1A6 1054 aa25.22■■□□□ 1.63
LSM7-206ENST00000591515 LILRB3O75022 631 aa25.21■■□□□ 1.63
LSM7-206ENST00000591515 NR1I2O75469 434 aa25.21■■□□□ 1.63
LSM7-206ENST00000591515 RPN1P04843 607 aaKnown RBP25.21■■□□□ 1.63
LSM7-206ENST00000591515 CDR2LQ86X02 465 aaPredicted RBP25.21■■□□□ 1.63
LSM7-206ENST00000591515 RUBCNQ92622 972 aa25.21■■□□□ 1.63
LSM7-206ENST00000591515 CCDC94Q9BW85 323 aaPredicted RBP25.21■■□□□ 1.63
LSM7-206ENST00000591515 KANSL3Q9P2N6 904 aa25.21■■□□□ 1.63
LSM7-206ENST00000591515 GIT1Q9Y2X7 761 aa25.21■■□□□ 1.63
LSM7-206ENST00000591515 OFD1O75665 1012 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 PPP1R37O75864 691 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 DCNP07585 359 aaKnown RBP25.2■■□□□ 1.62
LSM7-206ENST00000591515 SP9P0CG40 484 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 CASP1P29466 404 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 GBP2P32456 591 aaPredicted RBP25.2■■□□□ 1.62
LSM7-206ENST00000591515 RNASELQ05823 741 aaKnown RBP25.2■■□□□ 1.62
LSM7-206ENST00000591515 DPYDQ12882 1025 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 NOLC1Q14978 699 aaKnown RBP eCLIP25.2■■□□□ 1.62
LSM7-206ENST00000591515 ZC2HC1CQ53FD0 456 aaPredicted RBP25.2■■□□□ 1.62
LSM7-206ENST00000591515 EEF1DP3Q658K8 133 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 ZC3H14Q6PJT7 736 aaKnown RBP25.2■■□□□ 1.62
LSM7-206ENST00000591515 ZNF280BQ86YH2 543 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 SLC44A3Q8N4M1 653 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 CMASQ8NFW8 434 aaPredicted RBP25.2■■□□□ 1.62
LSM7-206ENST00000591515 CNTNAP3BQ96NU0 1288 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 CNTNAP3Q9BZ76 1288 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 MAN1C1Q9NR34 630 aa25.2■■□□□ 1.62
LSM7-206ENST00000591515 ANKFY1Q9P2R3 1169 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms