RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, humanhuman

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-208ENST00000591338 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 FBXL13Q8NEE6 735 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 NEK11Q8NG66 645 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 TAS1R2Q8TE23 839 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 CACTINQ8WUQ7 758 aaKnown RBP12.87□□□□□ -0.35
LINC00662-208ENST00000591338 SEPT8Q92599 483 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 SNX27Q96L92 541 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 FTHL17Q9BXU8 183 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 ADAM33Q9BZ11 813 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 INTS2Q9H0H0 1204 aaKnown RBP12.87□□□□□ -0.35
LINC00662-208ENST00000591338 SIX2Q9NPC8 291 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 PLCB1Q9NQ66 1216 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 RAB20Q9NX57 234 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 KLK14Q9P0G3 267 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 PCDHGA10Q9Y5H3 936 aa12.87□□□□□ -0.35
LINC00662-208ENST00000591338 SCN5AQ14524 2016 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TRIM43BA6NCK2 446 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 CCDC85CA6NKD9 419 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 C9IYK1 514 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 ENPP3O14638 875 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 EPHB6O15197 1021 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 PHACTR2O75167 634 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 VNN1O95497 513 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TIMP1P01033 207 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 CST3P01034 146 aaPredicted RBP12.86□□□□□ -0.35
LINC00662-208ENST00000591338 HLA-DRAP01903 254 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TNNC2P02585 160 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 NFICP08651 508 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TMEM191BP0C7N4 346 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TRIM21P19474 475 aaKnown RBP12.86□□□□□ -0.35
LINC00662-208ENST00000591338 CASP14P31944 242 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 FXR1P51114 621 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00662-208ENST00000591338 BIRC3Q13489 604 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TRIM14Q14142 442 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TMEM132DQ14C87 1099 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 ZBTB6Q15916 424 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TCTN1Q2MV58 587 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 KLHDC7AQ5VTJ3 777 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 SCARA3Q6AZY7 606 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TRIM65Q6PJ69 517 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 SLC24A5Q71RS6 500 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 ECHDC2Q86YB7 292 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 NT5DC4Q86YG4 428 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 HACE1Q8IYU2 909 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 LINC01599Q8WXQ3 324 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 APBB2Q92870 758 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 LPPQ93052 612 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TRIM43Q96BQ3 446 aaPredicted RBP12.86□□□□□ -0.35
LINC00662-208ENST00000591338 PGBD4Q96DM1 585 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 IQCDQ96DY2 449 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 ANKRD36BP1Q96IX9 119 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 ZMAT2Q96NC0 199 aaKnown RBP12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TSPAN18Q96SJ8 248 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 EDEM3Q9BZQ6 932 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 TTYH3Q9C0H2 523 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 CNTN3Q9P232 1028 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 DERAQ9Y315 318 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 C2CD2Q9Y426 696 aa12.86□□□□□ -0.35
LINC00662-208ENST00000591338 SMIM28A0A1B0GU29 152 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 MEIS3P2A8K0S8 358 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 AKR1B15C9JRZ8 316 aaPredicted RBP12.85□□□□□ -0.35
LINC00662-208ENST00000591338 HRO43593 1189 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 TPM1P09493 284 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 KCNE1P15382 129 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 ATF7P17544 494 aaPredicted RBP12.85□□□□□ -0.35
LINC00662-208ENST00000591338 ITGB8P26012 769 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 ADKP55263 362 aaKnown RBP12.85□□□□□ -0.35
LINC00662-208ENST00000591338 GSDMDP57764 484 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 GOLGA8FQ08AF8 430 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 GOLGA8DPQ0D2H9 430 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 LRMPQ12912 555 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 PHLDB3Q6NSJ2 640 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 AGMOQ6ZNB7 445 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 DEFB128Q7Z7B8 93 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 TC2NQ8N9U0 490 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 MTMR12Q9C0I1 747 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 GANQ9H2C0 597 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 PRDM5Q9NQX1 630 aaPredicted RBP12.85□□□□□ -0.35
LINC00662-208ENST00000591338 C1orf112Q9NSG2 853 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 RNF19AQ9NV58 838 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 DPP3Q9NY33 737 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 GIT1Q9Y2X7 761 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 LUC7L2Q9Y383 392 aaKnown RBP12.85□□□□□ -0.35
LINC00662-208ENST00000591338 TET1Q8NFU7 2136 aa12.85□□□□□ -0.35
LINC00662-208ENST00000591338 A0A1W2PQJ5 194 aa12.84□□□□□ -0.35
LINC00662-208ENST00000591338 EOMESO95936 686 aa12.84□□□□□ -0.35
LINC00662-208ENST00000591338 UCHL3P15374 230 aa12.84□□□□□ -0.35
LINC00662-208ENST00000591338 RAG1P15918 1043 aa12.84□□□□□ -0.35
LINC00662-208ENST00000591338 RFC2P35250 354 aa12.84□□□□□ -0.35
LINC00662-208ENST00000591338 KRT9P35527 623 aa12.84□□□□□ -0.35
LINC00662-208ENST00000591338 PIK3CAP42336 1068 aa12.84□□□□□ -0.35
LINC00662-208ENST00000591338 POLR2FP61218 127 aaKnown RBP12.84□□□□□ -0.35
LINC00662-208ENST00000591338 NCOA4Q13772 614 aa12.84□□□□□ -0.35
LINC00662-208ENST00000591338 GJB7Q6PEY0 223 aa12.84□□□□□ -0.35
LINC00662-208ENST00000591338 ZNF598Q86UK7 904 aaKnown RBP12.84□□□□□ -0.35
LINC00662-208ENST00000591338 TMEM130Q8N3G9 435 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms