RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 GOLGA6L4A6NEF3 574 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 GRXCR2A6NFK2 248 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 PODXLO00592 558 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 ADAM12O43184 909 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 B3GAT3O94766 335 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 RPN1P04843 607 aaKnown RBP12.53□□□□□ -0.4
VMP1-211ENST00000591315 ADRB2P07550 413 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 IL9P15248 144 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 GLUD2P49448 558 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 NDUFV1P49821 464 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 PPP2R3AQ06190 1150 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 ALCAMQ13740 583 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 LEXMQ3ZCV2 418 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 DCLRE1AQ6PJP8 1040 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 GLYCTKQ8IVS8 523 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 EFCAB13Q8IY85 973 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 C12orf76Q8N812 135 aaPredicted RBP12.53□□□□□ -0.4
VMP1-211ENST00000591315 SLC22A17Q8WUG5 538 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 ATXN2LQ8WWM7 1075 aaKnown RBP12.53□□□□□ -0.4
VMP1-211ENST00000591315 RIN2Q8WYP3 895 aaPredicted RBP12.53□□□□□ -0.4
VMP1-211ENST00000591315 MSLNLQ96KJ4 702 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 PLEKHA5Q9HAU0 1116 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 MRPL17Q9NRX2 175 aaKnown RBP12.53□□□□□ -0.4
VMP1-211ENST00000591315 EXOC1Q9NV70 894 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 HCFC2Q9Y5Z7 792 aa12.53□□□□□ -0.4
VMP1-211ENST00000591315 EIF3DO15371 548 aaKnown RBP eCLIP12.52□□□□□ -0.41
VMP1-211ENST00000591315 TEX28O15482 410 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 URODP06132 367 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 GARTP22102 1010 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 TKTP29401 623 aaKnown RBP12.52□□□□□ -0.41
VMP1-211ENST00000591315 ABCD1P33897 745 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 CYP2J2P51589 502 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 DSG1Q02413 1049 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 FAM160A1Q05DH4 1040 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 USP41Q3LFD5 358 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 ARMCX5Q6P1M9 558 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 SYCE2Q6PIF2 218 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 RSPO2Q6UXX9 243 aaPredicted RBP12.52□□□□□ -0.41
VMP1-211ENST00000591315 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 CEP57Q86XR8 500 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 CBWD2Q8IUF1 395 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 PPP2R3CQ969Q6 453 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 TMEM206Q9H813 350 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 AGPAT3Q9NRZ7 376 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 SLC38A7Q9NVC3 462 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 MAPK8IP1Q9UQF2 711 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 IRAK3Q9Y616 596 aa12.52□□□□□ -0.41
VMP1-211ENST00000591315 CARNS1A5YM72 827 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 TMEM189-UBE2V1I3L0A0 370 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 WEE2P0C1S8 567 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 TMEM132DQ14C87 1099 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 POSTNQ15063 836 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 BMT2Q1RMZ1 405 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 TJAP1Q5JTD0 557 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 SPATA1Q5VX52 437 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 LMBRD2Q68DH5 695 aaPredicted RBP12.51□□□□□ -0.41
VMP1-211ENST00000591315 PTCRAQ6ISU1 281 aaPredicted RBP12.51□□□□□ -0.41
VMP1-211ENST00000591315 KIAA1841Q6NSI8 718 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 STXBP4Q6ZWJ1 553 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 PALB2Q86YC2 1186 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 BRSK2Q8IWQ3 736 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 SMYD4Q8IYR2 804 aaPredicted RBP12.51□□□□□ -0.41
VMP1-211ENST00000591315 RDH13Q8NBN7 331 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 LNX1Q8TBB1 728 aaPredicted RBP12.51□□□□□ -0.41
VMP1-211ENST00000591315 COL25A1Q9BXS0 654 aaPredicted RBP12.51□□□□□ -0.41
VMP1-211ENST00000591315 RXFP1Q9HBX9 757 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 PDE11AQ9HCR9 933 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 CD207Q9UJ71 328 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 TRIOO75962 3097 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 SF3B1O75533 1304 aaKnown RBP eCLIP12.51□□□□□ -0.411e-7■■■■■ 172.3
VMP1-211ENST00000591315 PTPRJQ12913 1337 aa12.51□□□□□ -0.41
VMP1-211ENST00000591315 MUC3AQ02505 3323 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 SPTLC1O15269 473 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 MBTPS2O43462 519 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 NCK2O43639 380 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 EXTL3O43909 919 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 FGFR3P22607 806 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 KLRC2P26717 231 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 LRPAP1P30533 357 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 RPL9P32969 192 aaKnown RBP12.5□□□□□ -0.41
VMP1-211ENST00000591315 KYAT1Q16773 422 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 KNOP1Q1ED39 458 aaKnown RBP12.5□□□□□ -0.41
VMP1-211ENST00000591315 ANKRD54Q6NXT1 300 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 TMEM184AQ6ZMB5 413 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 TMEM87AQ8NBN3 555 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 ADAMTS19Q8TE59 1207 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 DDX27Q96GQ7 796 aaKnown RBP12.5□□□□□ -0.41
VMP1-211ENST00000591315 UROC1Q96N76 676 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 CDCA3Q99618 268 aaPredicted RBP12.5□□□□□ -0.41
VMP1-211ENST00000591315 CLSTN3Q9BQT9 956 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 TTPALQ9BTX7 342 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 KCTD10Q9H3F6 313 aa12.5□□□□□ -0.41
VMP1-211ENST00000591315 RBAKQ9NYW8 714 aaPredicted RBP12.5□□□□□ -0.41
VMP1-211ENST00000591315 UBQLN1Q9UMX0 589 aaKnown RBP12.5□□□□□ -0.41
VMP1-211ENST00000591315 TIMM13Q9Y5L4 95 aaPredicted RBP12.5□□□□□ -0.41
VMP1-211ENST00000591315 UBE4BO95155 1302 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 PRPF40AO75400 957 aaKnown RBP12.49□□□□□ -0.41
VMP1-211ENST00000591315 RHOBTB3O94955 611 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms