RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 ZSWIM2Q8NEG5 633 aa15.26■□□□□ 0.03
SCAMP4-212ENST00000590266 DDX27Q96GQ7 796 aaKnown RBP15.26■□□□□ 0.03
SCAMP4-212ENST00000590266 MSLNLQ96KJ4 702 aa15.26■□□□□ 0.03
SCAMP4-212ENST00000590266 CBWD1Q9BRT8 395 aa15.26■□□□□ 0.03
SCAMP4-212ENST00000590266 CHST7Q9NS84 486 aa15.26■□□□□ 0.03
SCAMP4-212ENST00000590266 STYXL1Q9Y6J8 313 aa15.26■□□□□ 0.03
SCAMP4-212ENST00000590266 PVALEFA0A1B0GWK0 134 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 EIF3DO15371 548 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 TRAPPC3O43617 180 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 LILRB3O75022 631 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 ZNF202O95125 648 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 EFEMP2O95967 443 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 ADH1AP07327 375 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 NFICP08651 508 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 SPATA31D3P0C874 917 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 TKTP29401 623 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 MCM4P33991 863 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 KCNC3Q14003 757 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 TMEM132DQ14C87 1099 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 KMT5BQ4FZB7 885 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 RARS2Q5T160 578 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 KANK3Q6NY19 840 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 KRBA2Q6ZNG9 492 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 SPATA31D4Q6ZUB0 917 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 PPFIBP1Q86W92 1011 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 C12orf76Q8N812 135 aaPredicted RBP15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 SMRP1Q8NCR6 262 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 BEST2Q8NFU1 509 aa15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 UBQLN1Q9UMX0 589 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 USP15Q9Y4E8 981 aaPredicted RBP15.25■□□□□ 0.03
SCAMP4-212ENST00000590266 TMEM189-UBE2V1I3L0A0 370 aa15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 XPOTO43592 962 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 RPN1P04843 607 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 WEE2P0C1S8 567 aa15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 GARTP22102 1010 aa15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 RPL9P32969 192 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 CLCN4P51793 760 aa15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 PSMD5Q16401 504 aa15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 CRELD2Q6UXH1 353 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 CD302Q8IX05 232 aa15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 SLC22A17Q8WUG5 538 aa15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 FBXL18Q96ME1 805 aa15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 RBAKQ9NYW8 714 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 CDH22Q9UJ99 828 aa15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 CIZ1Q9ULV3 898 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-212ENST00000590266 FAM237AA0A1B0GTK4 181 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 CLIC2O15247 247 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 KLRC4O43908 158 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 LDHAP00338 332 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 GLUD1P00367 558 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 SP100P23497 879 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 HOXD13P35453 343 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 CYP2J2P51589 502 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 CREMQ03060 361 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 EHHADHQ08426 723 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 SMAD2Q15796 467 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 SYCE2Q6PIF2 218 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 CD300LGQ6UXG3 332 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 TMEM184AQ6ZMB5 413 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 EPM2AIP1Q7L775 607 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 GPD1LQ8N335 351 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 ZNF507Q8TCN5 953 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 SCFD1Q8WVM8 642 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 CCDC47Q96A33 483 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 RXFP1Q9HBX9 757 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 MAN1C1Q9NR34 630 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 DZANK1Q9NVP4 752 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 BDP1A6H8Y1 2624 aa15.23■□□□□ 0.03
SCAMP4-212ENST00000590266 ATG2AQ2TAZ0 1938 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 PPEF2O14830 753 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 EXTL3O43909 919 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 IL18RAPO95256 599 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 HOXB8P17481 243 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 CYP3A5P20815 502 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 TFAMQ00059 246 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 STK4Q13043 487 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 ZBTB6Q15916 424 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 SPATA1Q5VX52 437 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 CES5AQ6NT32 575 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 TMC5Q6UXY8 1006 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 HS2ST1Q7LGA3 356 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 GJD3Q8N144 294 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 RDH13Q8NBN7 331 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 LNX1Q8TBB1 728 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 PIK3R5Q8WYR1 880 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 CCDC34Q96HJ3 373 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 S1PR5Q9H228 398 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 ASB7Q9H672 318 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 AGPAT3Q9NRZ7 376 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 HSPBP1Q9NZL4 362 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 CHMP5Q9NZZ3 219 aa15.22■□□□□ 0.03
SCAMP4-212ENST00000590266 UBE4BO95155 1302 aa15.21■□□□□ 0.03
SCAMP4-212ENST00000590266 ADAM12O43184 909 aa15.21■□□□□ 0.03
SCAMP4-212ENST00000590266 TGFB1I1O43294 461 aa15.21■□□□□ 0.03
SCAMP4-212ENST00000590266 TGM5O43548 720 aa15.21■□□□□ 0.03
SCAMP4-212ENST00000590266 MYL1P05976 194 aa15.21■□□□□ 0.03
SCAMP4-212ENST00000590266 ADRB2P07550 413 aa15.21■□□□□ 0.03
SCAMP4-212ENST00000590266 FGFR3P22607 806 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms