RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 CCDC83Q8IWF9 413 aa17.75■□□□□ 0.43
RAB3D-202ENST00000589655 FBXO18Q8NFZ0 1043 aa17.75■□□□□ 0.43
RAB3D-202ENST00000589655 CLDN23Q96B33 292 aa17.75■□□□□ 0.43
RAB3D-202ENST00000589655 TCEAL4Q96EI5 215 aa17.75■□□□□ 0.43
RAB3D-202ENST00000589655 TARS2Q9BW92 718 aaKnown RBP17.75■□□□□ 0.43
RAB3D-202ENST00000589655 GDE1Q9NZC3 331 aa17.75■□□□□ 0.43
RAB3D-202ENST00000589655 ARHGAP28Q9P2N2 729 aa17.75■□□□□ 0.43
RAB3D-202ENST00000589655 FBXO4Q9UKT5 387 aa17.75■□□□□ 0.43
RAB3D-202ENST00000589655 PHLPP2Q6ZVD8 1323 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 NCOR2Q9Y618 2525 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 PP2D1A8MPX8 630 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 E9PMD0 336 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 PODXLO00592 558 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 LAMTOR5O43504 91 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 PROZP22891 400 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 CCR2P41597 374 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 TOB1P50616 345 aaPredicted RBP17.74■□□□□ 0.43
RAB3D-202ENST00000589655 ZNF568Q3ZCX4 644 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 ZNF687Q8N1G0 1237 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 TMEM130Q8N3G9 435 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 IGSF22Q8N9C0 903 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 NELL1Q92832 810 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 C18orf25Q96B23 403 aaPredicted RBP17.74■□□□□ 0.43
RAB3D-202ENST00000589655 RUSC1Q9BVN2 902 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 CCDC94Q9BW85 323 aaPredicted RBP17.74■□□□□ 0.43
RAB3D-202ENST00000589655 TMEM134Q9H6X4 195 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 HEBP1Q9NRV9 189 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 LRWD1Q9UFC0 647 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 COL4A2P08572 1712 aa17.74■□□□□ 0.43
RAB3D-202ENST00000589655 CCDC169A6NNP5 214 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 KINO60870 393 aaKnown RBP17.73■□□□□ 0.43
RAB3D-202ENST00000589655 HIP1RO75146 1068 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 ATF2P15336 505 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 KCNE1P15382 129 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 PTPN2P17706 415 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 CSTF1Q05048 431 aaKnown RBP17.73■□□□□ 0.43
RAB3D-202ENST00000589655 IL17AQ16552 155 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 ZBTB41Q5SVQ8 909 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 KCNK18Q7Z418 384 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 TCEAL8Q8IYN2 117 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 ZBTB44Q8NCP5 570 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 ZBTB45Q96K62 511 aaPredicted RBP17.73■□□□□ 0.43
RAB3D-202ENST00000589655 HINFPQ9BQA5 517 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 TOPORSQ9NS56 1045 aaPredicted RBP17.73■□□□□ 0.43
RAB3D-202ENST00000589655 DLL3Q9NYJ7 618 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 DAXXQ9UER7 740 aaPredicted RBP17.73■□□□□ 0.43
RAB3D-202ENST00000589655 FBXL5Q9UKA1 691 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 LIMCH1Q9UPQ0 1083 aa17.73■□□□□ 0.43
RAB3D-202ENST00000589655 CITO14578 2027 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 F5P12259 2224 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 PDCD11Q14690 1871 aaKnown RBP17.72■□□□□ 0.43
RAB3D-202ENST00000589655 SYN3O14994 580 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 CDC25AP30304 524 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 TRAPPC10P48553 1259 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 YARSP54577 528 aaKnown RBP17.72■□□□□ 0.43
RAB3D-202ENST00000589655 ARPP19P56211 112 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 PDIA5Q14554 519 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 FAM78AQ5JUQ0 283 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 TSSK4Q6SA08 328 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 APBB1IPQ7Z5R6 666 aaPredicted RBP17.72■□□□□ 0.43
RAB3D-202ENST00000589655 SNX29Q8TEQ0 813 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 ELSPBP1Q96BH3 223 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 CORO1BQ9BR76 489 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 LLPHQ9BRT6 129 aaKnown RBP17.72■□□□□ 0.43
RAB3D-202ENST00000589655 MMTAG2Q9BU76 263 aaKnown RBP17.72■□□□□ 0.43
RAB3D-202ENST00000589655 MRPL4Q9BYD3 311 aaKnown RBP17.72■□□□□ 0.43
RAB3D-202ENST00000589655 SLC38A7Q9NVC3 462 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 CNTN3Q9P232 1028 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 PCDHB6Q9Y5E3 794 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 INSL5Q9Y5Q6 135 aa17.72■□□□□ 0.43
RAB3D-202ENST00000589655 PRRG1O14668 218 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 LILRB5O75023 590 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 MOSPD3O75425 235 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 LRG1P02750 347 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 MCF2P10911 925 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 RPS9P46781 194 aaKnown RBP17.71■□□□□ 0.43
RAB3D-202ENST00000589655 PTGDRQ13258 359 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 GRM2Q14416 872 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 RINT1Q6NUQ1 792 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 C1orf186Q6ZWK4 172 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 DGLUCYQ7Z3D6 616 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 HS6ST3Q8IZP7 471 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 SUSD3Q96L08 255 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 ZSWIM3Q96MP5 696 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 ACAP3Q96P50 834 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 CYP4F11Q9HBI6 524 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 PRMT8Q9NR22 394 aaPredicted RBP17.71■□□□□ 0.43
RAB3D-202ENST00000589655 PCDHGA2Q9Y5H1 932 aa17.71■□□□□ 0.43
RAB3D-202ENST00000589655 NCANO14594 1321 aa17.71■□□□□ 0.42
RAB3D-202ENST00000589655 SFI1A8K8P3 1242 aa17.7■□□□□ 0.42
RAB3D-202ENST00000589655 SPTLC1O15269 473 aa17.7■□□□□ 0.42
RAB3D-202ENST00000589655 SLC16A4O15374 487 aa17.7■□□□□ 0.42
RAB3D-202ENST00000589655 U2AF2P26368 475 aaKnown RBP eCLIP17.7■□□□□ 0.42
RAB3D-202ENST00000589655 ELF1P32519 619 aa17.7■□□□□ 0.42
RAB3D-202ENST00000589655 MAGEA9P43362 315 aa17.7■□□□□ 0.42
RAB3D-202ENST00000589655 DMP1Q13316 513 aaPredicted RBP17.7■□□□□ 0.42
RAB3D-202ENST00000589655 PUM1Q14671 1186 aaKnown RBP eCLIP17.7■□□□□ 0.42
RAB3D-202ENST00000589655 SLC10A6Q3KNW5 377 aa17.7■□□□□ 0.42
RAB3D-202ENST00000589655 SEZ6Q53EL9 994 aa17.7■□□□□ 0.42
RAB3D-202ENST00000589655 MPZL3Q6UWV2 235 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms