RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 MCM7P33993 719 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 BRCC3P46736 316 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 EFNA5P52803 228 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 ROR1Q01973 937 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 ANKRD1Q15327 319 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 UPP1Q16831 310 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 CYP4A22Q5TCH4 519 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 PRR23BQ6ZRT6 265 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 DIS3L2Q8IYB7 885 aaKnown RBP16.74■□□□□ 0.27
ACTN4-211ENST00000589528 MTMR9Q96QG7 549 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 IER2Q9BTL4 223 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 CCDC113Q9H0I3 377 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 AVENQ9NQS1 362 aaPredicted RBP16.74■□□□□ 0.27
ACTN4-211ENST00000589528 TOPORSQ9NS56 1045 aaPredicted RBP16.74■□□□□ 0.27
ACTN4-211ENST00000589528 ACACBO00763 2458 aa16.74■□□□□ 0.27
ACTN4-211ENST00000589528 H7C4K7 107 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 MED24O75448 989 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 CTDNEP1O95476 244 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 CYP11B2P19099 503 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 CCR3P51677 355 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 SPEM2Q0P670 501 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 LAIR1Q6GTX8 287 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 IQCEQ6IPM2 695 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 CELF5Q8N6W0 485 aaKnown RBP16.73■□□□□ 0.27
ACTN4-211ENST00000589528 FAM3CQ92520 227 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 POLR3CQ9BUI4 534 aaPredicted RBP16.73■□□□□ 0.27
ACTN4-211ENST00000589528 KIFC3Q9BVG8 833 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 CCDC94Q9BW85 323 aaPredicted RBP16.73■□□□□ 0.27
ACTN4-211ENST00000589528 CHRDQ9H2X0 955 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 SLC38A7Q9NVC3 462 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 NUB1Q9Y5A7 615 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 EPG5Q9HCE0 2579 aa16.73■□□□□ 0.27
ACTN4-211ENST00000589528 SMIM28A0A1B0GU29 152 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 WDR27A2RRH5 827 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 ATF2P15336 505 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 PSMC3P17980 439 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 GDI1P31150 447 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 FAM78AQ5JUQ0 283 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 SLC8B1Q6J4K2 584 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 C3orf58Q8NDZ4 430 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 TCEAL4Q96EI5 215 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 ZNF512Q96ME7 567 aaPredicted RBP16.72■□□□□ 0.27
ACTN4-211ENST00000589528 ASB16Q96NS5 453 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 SLITRK6Q9H5Y7 841 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 LMAN1LQ9HAT1 526 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 INSL5Q9Y5Q6 135 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 PIAS3Q9Y6X2 628 aa16.72■□□□□ 0.27
ACTN4-211ENST00000589528 K7ERI5 159 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 PODXLO00592 558 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 WNT7AO00755 349 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 ZNF263O14978 683 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 ABLIM3O94929 683 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 EDN1P05305 212 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 FCARP24071 287 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 IGFBP6P24592 240 aaPredicted RBP16.71■□□□□ 0.27
ACTN4-211ENST00000589528 RPA1P27694 616 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 OSTNP61366 133 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 FZD5Q13467 585 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 ZNF568Q3ZCX4 644 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 PRSS36Q5K4E3 855 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 HAUS3Q68CZ6 603 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 TCEAL8Q8IYN2 117 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 NETO1Q8TDF5 533 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 KIFAP3Q92845 792 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 SMARCD2Q92925 531 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 TMEM60Q9H2L4 133 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 ZNF334Q9HCZ1 680 aaPredicted RBP16.71■□□□□ 0.27
ACTN4-211ENST00000589528 PARD6AQ9NPB6 346 aa16.71■□□□□ 0.27
ACTN4-211ENST00000589528 SYN3O14994 580 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 MICAL2O94851 1124 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 FDPSP14324 419 aaKnown RBP16.7■□□□□ 0.26
ACTN4-211ENST00000589528 CXCL12P48061 93 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 SAFBQ15424 915 aaKnown RBP eCLIP16.7■□□□□ 0.264e-6■■■■□ 22.6
ACTN4-211ENST00000589528 CTXN3Q4LDR2 81 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 TPGS2Q68CL5 300 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 CD300LGQ6UXG3 332 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 VITQ6UXI7 678 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.7■□□□□ 0.26
ACTN4-211ENST00000589528 YAF2Q8IY57 180 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 NECAB1Q8N987 351 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 CSGALNACT1Q8TDX6 532 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 DEPDC1BQ8WUY9 529 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 POLD4Q9HCU8 107 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 ASAH2Q9NR71 780 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 TNFSF13BQ9Y275 285 aa16.7■□□□□ 0.26
ACTN4-211ENST00000589528 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.7■□□□□ 0.26
ACTN4-211ENST00000589528 CCDC169A6NNP5 214 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 SEC24AO95486 1093 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 RETP07949 1114 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 MYL4P12829 197 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 CPB1P15086 417 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 KCNA4P22459 653 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 TGM1P22735 817 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 MCM4P33991 863 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 GRM5P41594 1212 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 SOX4Q06945 474 aaPredicted RBP16.69■□□□□ 0.26
ACTN4-211ENST00000589528 TWF1Q12792 350 aa16.69■□□□□ 0.26
ACTN4-211ENST00000589528 SIM2Q14190 667 aaPredicted RBP16.69■□□□□ 0.26
ACTN4-211ENST00000589528 ZNF280DQ6N043 979 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms