RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 DHX38Q92620 1227 aaKnown RBP12.98□□□□□ -0.33
CCBE1-203ENST00000589116 KAT5Q92993 513 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 FAM212AQ96EL1 285 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 CCDC94Q9BW85 323 aaPredicted RBP12.98□□□□□ -0.33
CCBE1-203ENST00000589116 LACRTQ9GZZ8 138 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 CDHR5Q9HBB8 845 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 NAGPAQ9UK23 515 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 NENFQ9UMX5 172 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 GUCA1BQ9UMX6 200 aa12.98□□□□□ -0.33
CCBE1-203ENST00000589116 MROH7Q68CQ1 1323 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 RCCD1A6NED2 376 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 MOXD2PA6NHM9 499 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 ASS1P00966 412 aaKnown RBP12.97□□□□□ -0.33
CCBE1-203ENST00000589116 INHAP05111 366 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 NOP14P78316 857 aaKnown RBP12.97□□□□□ -0.33
CCBE1-203ENST00000589116 MRPS6P82932 125 aaKnown RBP12.97□□□□□ -0.33
CCBE1-203ENST00000589116 TFAMQ00059 246 aaKnown RBP12.97□□□□□ -0.33
CCBE1-203ENST00000589116 ZNF569Q5MCW4 686 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 GDF6Q6KF10 455 aaPredicted RBP12.97□□□□□ -0.33
CCBE1-203ENST00000589116 EFCAB13Q8IY85 973 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 TAF4BQ92750 862 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 TATDN2Q93075 761 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 FAXDC2Q96IV6 333 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 ACAP3Q96P50 834 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 WDR24Q96S15 920 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 TSEN34Q9BSV6 310 aaKnown RBP12.97□□□□□ -0.33
CCBE1-203ENST00000589116 PI4K2AQ9BTU6 479 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 HTATIP2Q9BUP3 242 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 CELF4Q9BZC1 486 aaKnown RBP12.97□□□□□ -0.33
CCBE1-203ENST00000589116 PLEKHA5Q9HAU0 1116 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 INTUQ9ULD6 942 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 C2CD2Q9Y426 696 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 TRPV2Q9Y5S1 764 aa12.97□□□□□ -0.33
CCBE1-203ENST00000589116 BTNL10A8MVZ5 291 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 LACTBL1A8MY62 500 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 DDX3XO00571 662 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCBE1-203ENST00000589116 FGFR4P22455 802 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 GRK4P32298 578 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 TRPC3Q13507 836 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 CUL2Q13617 745 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 SGSM1Q2NKQ1 1148 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 FAM47CQ5HY64 1035 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 ALKBH5Q6P6C2 394 aaKnown RBP12.96□□□□□ -0.33
CCBE1-203ENST00000589116 TMEM192Q8IY95 271 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 RNF10Q8N5U6 811 aaKnown RBP12.96□□□□□ -0.33
CCBE1-203ENST00000589116 SLC30A5Q8TAD4 765 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 OLIG1Q8TAK6 271 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 TMEM40Q8WWA1 233 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 SECISBP2LQ93073 1101 aaKnown RBP12.96□□□□□ -0.33
CCBE1-203ENST00000589116 LRCH3Q96II8 777 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 FAM84AQ96KN4 292 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 COL25A1Q9BXS0 654 aaPredicted RBP12.96□□□□□ -0.33
CCBE1-203ENST00000589116 IRX2Q9BZI1 471 aaPredicted RBP12.96□□□□□ -0.33
CCBE1-203ENST00000589116 HMX1Q9NP08 348 aaPredicted RBP12.96□□□□□ -0.33
CCBE1-203ENST00000589116 DERAQ9Y315 318 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.33
CCBE1-203ENST00000589116 A0A1W2PPC1 479 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 SOX1O00570 391 aaPredicted RBP12.96□□□□□ -0.34
CCBE1-203ENST00000589116 NPTXRO95502 500 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 ABL1P00519 1130 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 TNFAIP3P21580 790 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 USP8P40818 1118 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 PDE6CP51160 858 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 BPIFB4P59827 614 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 SLC35F6Q8N357 371 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 TRIM58Q8NG06 486 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 EPS8L1Q8TE68 723 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 AGPAT1Q99943 283 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 PRO3102Q9H379 93 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 L2HGDHQ9H9P8 463 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 TRIM10Q9UDY6 481 aa12.96□□□□□ -0.34
CCBE1-203ENST00000589116 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.34
CCBE1-203ENST00000589116 CTAGE9A4FU28 777 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 FANCGO15287 622 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 TACC1O75410 805 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 NFICP08651 508 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 ACLYP53396 1101 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 YARSP54577 528 aaKnown RBP12.95□□□□□ -0.34
CCBE1-203ENST00000589116 ITGA7Q13683 1181 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 TMEM132DQ14C87 1099 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 JADE1Q6IE81 842 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 LNX1Q8TBB1 728 aaPredicted RBP12.95□□□□□ -0.34
CCBE1-203ENST00000589116 SH3TC2Q8TF17 1288 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 TSPAN18Q96SJ8 248 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 NAPGQ99747 312 aaPredicted RBP12.95□□□□□ -0.34
CCBE1-203ENST00000589116 TRIM6Q9C030 488 aaPredicted RBP12.95□□□□□ -0.34
CCBE1-203ENST00000589116 NIF3L1Q9GZT8 377 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 APOBEC3GQ9HC16 384 aaKnown RBP12.95□□□□□ -0.34
CCBE1-203ENST00000589116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCBE1-203ENST00000589116 NOCTQ9UK39 431 aaKnown RBP12.95□□□□□ -0.34
CCBE1-203ENST00000589116 TFR2Q9UP52 801 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 CNTN6Q9UQ52 1028 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 CDY2AQ9Y6F7 541 aa12.95□□□□□ -0.34
CCBE1-203ENST00000589116 GRIN2DO15399 1336 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
CCBE1-203ENST00000589116 MEFVO15553 781 aaPredicted RBP12.94□□□□□ -0.34
CCBE1-203ENST00000589116 CYP26A1O43174 497 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 CST3P01034 146 aaPredicted RBP12.94□□□□□ -0.34
CCBE1-203ENST00000589116 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms