RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 TAP1Q03518 808 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 ENPEPQ07075 957 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 DUOXA2Q1HG44 320 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 C1orf220Q5T0J3 134 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 TCERG1LQ5VWI1 586 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 KCNT2Q6UVM3 1135 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 IRF2BP1Q8IU81 584 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 DHX40Q8IX18 779 aaKnown RBP16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 ZNF516Q92618 1163 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 RABGGTAQ92696 567 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 UROC1Q96N76 676 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 SLC28A3Q9HAS3 691 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 CBX8Q9HC52 389 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 SAMSN1Q9NSI8 373 aaKnown RBP16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 DPP3Q9NY33 737 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 FAN1Q9Y2M0 1017 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 PRG3Q9Y2Y8 225 aaPredicted RBP16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 RWDD3Q9Y3V2 267 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 PCDHB12Q9Y5F1 795 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 RALGAPA2Q2PPJ7 1873 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 FNDC1Q4ZHG4 1894 aaPredicted RBP16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 BECN2A8MW95 431 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 NT5C1B-RDH14C9J2C7 533 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 PODXLO00592 558 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 NRP1O14786 923 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 ALDH2P05091 517 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 GALTP07902 379 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 LRPAP1P30533 357 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 RPL9P32969 192 aaKnown RBP16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 CTNNB1P35222 781 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 CLCNKBP51801 687 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 AP3M2P53677 418 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 MARSP56192 900 aaKnown RBP16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 NCAPHQ15003 741 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 SPRED2Q7Z698 418 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 DDX27Q96GQ7 796 aaKnown RBP16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 TGS1Q96RS0 853 aaKnown RBP16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 PAAF1Q9BRP4 392 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 C17orf80Q9BSJ5 609 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 MMRN2Q9H8L6 949 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 MTUS1Q9ULD2 1270 aa16.72■□□□□ 0.27
RPRD1A-208ENST00000589050 CARNS1A5YM72 827 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 KCNJ18B7U540 433 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 STX10O60499 249 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 ITGB3P05106 788 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 BMPR1AP36894 532 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 MTIF2P46199 727 aaKnown RBP16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 GCLMP48507 274 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 MCCD1P59942 119 aaPredicted RBP16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 BIRC3Q13489 604 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 KCNJ12Q14500 433 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 IQCB1Q15051 598 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 UPP1Q16831 310 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 CDKAL1Q5VV42 579 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 TRAPPC11Q7Z392 1133 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 LUZP1Q86V48 1076 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 C1orf127Q8N9H9 656 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 FAM200AQ8TCP9 573 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 SLC35C1Q96A29 364 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 SAMD11Q96NU1 681 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 COLEC11Q9BWP8 271 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 ITGA11Q9UKX5 1188 aa16.71■□□□□ 0.27
RPRD1A-208ENST00000589050 F8W810 466 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 SOX1O00570 391 aaPredicted RBP16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 PHACTR2O75167 634 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 KIF4AO95239 1232 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 KRT19P08727 400 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 POLR2BP30876 1174 aaKnown RBP16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 PPM1AP35813 382 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 ERVK-21P61565 698 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 PPP3CAQ08209 521 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 EPC2Q52LR7 807 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 TCP11X2Q5H9J9 407 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 TDRD10Q5VZ19 366 aaKnown RBP16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 C9orf57Q5W0N0 161 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 DCLRE1AQ6PJP8 1040 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 SLC39A11Q8N1S5 342 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 HASPINQ8TF76 798 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 ANP32EQ9BTT0 268 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 CERS4Q9HA82 394 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 SPG21Q9NZD8 308 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 AGAP1Q9UPQ3 857 aa16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 R3HCC1Q9Y3T6 440 aaKnown RBP16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.7■□□□□ 0.26
RPRD1A-208ENST00000589050 ANO9A1A5B4 782 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 PPEF2O14830 753 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 B3GAT3O94766 335 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 C4BPAP04003 597 aaKnown RBP16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 IGFBP6P24592 240 aaPredicted RBP16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 EEF1GP26641 437 aaKnown RBP16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 GTF2H1P32780 548 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 RBP5P82980 135 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 SV2AQ7L0J3 742 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 TMEM173Q86WV6 379 aaPredicted RBP16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 KLHL23Q8NBE8 558 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 C3orf58Q8NDZ4 430 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 FBXO22Q8NEZ5 403 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 BCL7CQ8WUZ0 217 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms