RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 POMCP01189 267 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 C4BPAP04003 597 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 LRPAP1P30533 357 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 PNPLA4P41247 253 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 GCLMP48507 274 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 WNT7BP56706 349 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 UBASH3AP57075 661 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 HTRA4P83105 476 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 PPP3CAQ08209 521 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 TRPC3Q13507 836 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 SV2AQ7L0J3 742 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 APTXQ7Z2E3 356 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 TRAPPC11Q7Z392 1133 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 FBXL13Q8NEE6 735 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 TAF4BQ92750 862 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 ZNF560Q96MR9 790 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 POP1Q99575 1024 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 RAD9AQ99638 391 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 TMEM175Q9BSA9 504 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 CXXC1Q9P0U4 656 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 COQ4Q9Y3A0 265 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 PTPRJQ12913 1337 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 FSD2A1L4K1 749 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 ZC3H11AO75152 810 aaKnown RBP eCLIP18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 ATICP31939 592 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 PIK3CAP42336 1068 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 RBP5P82980 135 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 DSC1Q08554 894 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 BTG3Q14201 252 aaPredicted RBP18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 TDRD10Q5VZ19 366 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 GBP6Q6ZN66 633 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 LRRC52Q8N7C0 313 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 OR5B17Q8NGF7 314 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 FAM81BQ96LP2 452 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 VPS16Q9H269 839 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 MMRN2Q9H8L6 949 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 RTN4Q9NQC3 1192 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 CEP290O15078 2479 aa18.3■□□□□ 0.52
SCAMP4-211ENST00000588907 STAU1O95793 577 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 UBXN1Q04323 297 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 MYO1EQ12965 1108 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 NCOA4Q13772 614 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 GSE1Q14687 1217 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 SHHQ15465 462 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 NAB2Q15742 525 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 EXOC3L4Q17RC7 722 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 CBWD6Q4V339 395 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 CBWD3Q5JTY5 395 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 CBWD5Q5RIA9 395 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 LMBRD2Q68DH5 695 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 SMYD5Q6GMV2 418 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 C1orf127Q8N9H9 656 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 ZNF516Q92618 1163 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 FAXDC2Q96IV6 333 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 AAASQ9NRG9 546 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 TUBGCP4Q9UGJ1 667 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 PLAGL2Q9UPG8 496 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 RWDD3Q9Y3V2 267 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 DAAM1Q9Y4D1 1078 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 PDE4DIPQ5VU43 2346 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 PTPRSQ13332 1948 aa18.29■□□□□ 0.52
SCAMP4-211ENST00000588907 A0A1W2PQC6 194 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 ANO9A1A5B4 782 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 ARHGEF37A1IGU5 675 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 TLL1O43897 1013 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 ITGB3P05106 788 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 KRT19P08727 400 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 P4HA1P13674 534 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 LAG3P18627 525 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 MRE11P49959 708 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 PLCB2Q00722 1185 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 SGSM1Q2NKQ1 1148 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 WDR44Q5JSH3 913 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 C9orf50Q5SZB4 431 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 C9orf57Q5W0N0 161 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 C18orf25Q96B23 403 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 IQCDQ96DY2 449 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 ERGIC2Q96RQ1 377 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 TRIM5Q9C035 493 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 VRTNQ9H8Y1 702 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 GRPEL1Q9HAV7 217 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 RAB20Q9NX57 234 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 MIOSQ9NXC5 875 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 IFNKQ9P0W0 207 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 GCNT4Q9P109 453 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 STK39Q9UEW8 545 aa18.28■□□□□ 0.52
SCAMP4-211ENST00000588907 TMEM189-UBE2V1I3L0A0 370 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 PODXLO00592 558 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 PIRO00625 290 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 HLA-DRAP01903 254 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 RFX1P22670 979 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 POLR2BP30876 1174 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 ALDH7A1P49419 539 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 AFF1P51825 1210 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 NR1I3Q14994 352 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 UPP1Q16831 310 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 SV2CQ496J9 727 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 PAN2Q504Q3 1202 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 EPC2Q52LR7 807 aa18.27■□□□□ 0.52
SCAMP4-211ENST00000588907 FAM117BQ6P1L5 589 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms