RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 TM7SF3Q9NS93 570 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 KCND1Q9NSA2 647 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 SMC4Q9NTJ3 1288 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 GPRC5DQ9NZD1 345 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 AQP12BA6NM10 295 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 PODXLO00592 558 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 ADCY6O43306 1168 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 MBD4O95243 580 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 CD1AP06126 327 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 PCSK1P29120 753 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 SESN2P58004 480 aaPredicted RBP8.97□□□□□ -0.97
VMP1-208ENST00000588617 ZNF200P98182 395 aaPredicted RBP8.97□□□□□ -0.97
VMP1-208ENST00000588617 CACNB2Q08289 660 aaPredicted RBP8.97□□□□□ -0.97
VMP1-208ENST00000588617 MTM1Q13496 603 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 TIGD6Q17RP2 521 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 SLC44A4Q53GD3 710 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 RRAGBQ5VZM2 374 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 CATSPERGQ6ZRH7 1159 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 UNC13DQ70J99 1090 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 CPA5Q8WXQ8 436 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 INTS4Q96HW7 963 aaKnown RBP8.97□□□□□ -0.97
VMP1-208ENST00000588617 ZSWIM3Q96MP5 696 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 SEC62Q99442 399 aaKnown RBP8.97□□□□□ -0.97
VMP1-208ENST00000588617 SYT3Q9BQG1 590 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 SLC26A6Q9BXS9 759 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 DPH1Q9BZG8 443 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 SMURF2Q9HAU4 748 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 VPS45Q9NRW7 570 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 SPATA6Q9NWH7 488 aaPredicted RBP8.97□□□□□ -0.97
VMP1-208ENST00000588617 IFT80Q9P2H3 777 aaPredicted RBP8.97□□□□□ -0.97
VMP1-208ENST00000588617 CCDC39Q9UFE4 941 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 FBXO10Q9UK96 956 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 ITGB1BP2Q9UKP3 347 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 MED16Q9Y2X0 877 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 ACTL7AQ9Y615 435 aa8.97□□□□□ -0.97
VMP1-208ENST00000588617 OR14I1A6ND48 311 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 PRSS47A8MTI9 375 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 MED26O95402 600 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 FPR1P21462 350 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 PTPN7P35236 360 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 AFMP43652 599 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 STAT5BP51692 787 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 PLCL1Q15111 1095 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 EMC10Q5UCC4 262 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 CNKSR3Q6P9H4 555 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 STK32CQ86UX6 486 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 ADGRG2Q8IZP9 1017 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 CCDC89Q8N998 374 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 REPS2Q8NFH8 660 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 IPO4Q8TEX9 1081 aaKnown RBP8.96□□□□□ -0.98
VMP1-208ENST00000588617 LRRC46Q96FV0 321 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 SIDT1Q9NXL6 827 aaKnown RBP8.96□□□□□ -0.98
VMP1-208ENST00000588617 ADAMTS6Q9UKP5 1117 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 CTNND2Q9UQB3 1225 aa8.96□□□□□ -0.98
VMP1-208ENST00000588617 RUVBL1Q9Y265 456 aaKnown RBP8.96□□□□□ -0.98
VMP1-208ENST00000588617 FAM234BA2RU67 622 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 IPO5O00410 1097 aaKnown RBP8.95□□□□□ -0.98
VMP1-208ENST00000588617 ABLIM1O14639 778 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 TIMM44O43615 452 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 ALDH1A2O94788 518 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 MATN4O95460 622 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 GASTP01350 101 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 CYP2C8P10632 490 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 NCAM1P13591 858 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 CNTFP26441 200 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 GUCY1A2P33402 732 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 CRHR1P34998 444 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 PHKA1P46020 1223 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 EIF5P55010 431 aaKnown RBP8.95□□□□□ -0.98
VMP1-208ENST00000588617 WNT3AP56704 352 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 PTK2BQ14289 1009 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 MICU3Q86XE3 530 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 COLGALT2Q8IYK4 626 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 TRMT2AQ8IZ69 625 aaKnown RBP8.95□□□□□ -0.98
VMP1-208ENST00000588617 SDR16C5Q8N3Y7 309 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 PCSK9Q8NBP7 692 aaKnown RBP8.95□□□□□ -0.98
VMP1-208ENST00000588617 CYP2W1Q8TAV3 490 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 CLIC6Q96NY7 704 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 ZNF518BQ9C0D4 1074 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 PAK6Q9NQU5 681 aaPredicted RBP8.95□□□□□ -0.98
VMP1-208ENST00000588617 TBC1D23Q9NUY8 699 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 CROTQ9UKG9 612 aa8.95□□□□□ -0.98
VMP1-208ENST00000588617 hCG_1984214I3L0E3 225 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 AREL1O15033 823 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 COBLO75128 1261 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 ITGA10O75578 1167 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 NDST3O95803 873 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 ABHD16AO95870 558 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 POLBP06746 335 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 CARSP49589 748 aaKnown RBP8.94□□□□□ -0.98
VMP1-208ENST00000588617 NOMO3P69849 1222 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 MPP1Q00013 466 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 CTBP1Q13363 440 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 RAB32Q13637 225 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 HABP2Q14520 560 aaPredicted RBP8.94□□□□□ -0.98
VMP1-208ENST00000588617 RAB30Q15771 203 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 ZMYM1Q5SVZ6 1142 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 FAAH2Q6GMR7 532 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 FAM180BQ6P0A1 224 aa8.94□□□□□ -0.98
VMP1-208ENST00000588617 C1orf122Q6ZSJ8 110 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms